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Browsing Tag

bioinformatics

28 posts
SScience
Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome | Microbiome
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome | Microbiome

  • October 30, 2025
Addison S, Armstrong C, Wigley K, Hartley R, Wakelin S. What matters most? Assessment of within-canopy factors influencing…
TTechnology
High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons | Microbiome
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High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons | Microbiome

  • October 28, 2025
Song S, Liu Y, Wang NR, Haney CH. Mechanisms in plant-microbiome interactions: lessons from model systems. Curr Opin…
SScience
Natural sex reversal imparts permanent compositional changes to the swamp eel gonadal microbiome | Microbiome
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Natural sex reversal imparts permanent compositional changes to the swamp eel gonadal microbiome | Microbiome

  • October 24, 2025
Fish maintenance and trial design The sourcing of swamp eel and the rearing procedures employed in this study…
GGenetics
World Record Set For Fastest Genome Sequencing | Health
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World Record Set For Fastest Genome Sequencing | Health

  • October 20, 2025
Key Takeaways Researchers have set a new world record for fastest whole human genome sequencing The team completed…
GGenetics
World Record Set For Fastest Genome Sequencing | Health
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World Record Set For Fastest Genome Sequencing | Health

  • October 17, 2025
Key Takeaways Researchers have set a new world record for fastest whole human genome sequencing The team completed…
GGenetics
SPAmix: a scalable, accurate, and universal analysis framework for large-scale genetic association studies in admixed populations | Genome Biology
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SPAmix: a scalable, accurate, and universal analysis framework for large-scale genetic association studies in admixed populations | Genome Biology

  • October 16, 2025
Model residuals of linear regression and logistic regression Linear regression and logistic regression are regular models to fit…
GGenetics
SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics
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SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics

  • October 14, 2025
Software architecture SAGPEK mainly processes Sanger sequencing results of two kinds of samples: diploids such as humans and…
GGenetics
A novel gene expression stability metric to unveil homeostasis and regulation | Genome Biology
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A novel gene expression stability metric to unveil homeostasis and regulation | Genome Biology

  • October 10, 2025
K-proportion and gene homeostasis Z-Index identify regulatory genes As cells of the same type and in the same…
GGenetics
Incorporating additive genetic effects and linkage disequilibrium information to discover gene-environment interactions using BV-LDER-GE | Genome Biology
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Incorporating additive genetic effects and linkage disequilibrium information to discover gene-environment interactions using BV-LDER-GE | Genome Biology

  • October 3, 2025
Model overview We consider the following model to incorporate both additive and interaction effects: $${Y}_{i}={\sum }_{j=1}^{M}{G}_{ji}{\beta }_{j}+{\sum }_{j=1}^{M}{S}_{ji}{\gamma…
TTechnology
Genome of the green-head ant, Rhytidoponera metallica, reveals mechanisms of toxin evolution in a genetically hyper-diverse eusocial species | Genome Biology
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Genome of the green-head ant, Rhytidoponera metallica, reveals mechanisms of toxin evolution in a genetically hyper-diverse eusocial species | Genome Biology

  • September 26, 2025
Genome from a single ant resolves allelic and paralogous toxin diversity Assembling the HiFi reads obtained from DNA…
HHealth
From gut to gamete: how the microbiome influences fertility and preconception health | Microbiome
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From gut to gamete: how the microbiome influences fertility and preconception health | Microbiome

  • September 26, 2025
Inhorn MC, Patrizio P. Infertility around the globe: new thinking on gender, reproductive technologies and global movements in…
GGenetics
Genomenon and Compass Bioinformatics Partner to Transform Genomic Diagnostics in the U.S. and Japan
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Genomenon and Compass Bioinformatics Partner to Transform Genomic Diagnostics in the U.S. and Japan

  • September 23, 2025
Mastermind® FLEX Data powers Compass Bioinformatics’s InheriNext® platform, bringing unparalleled genomic evidence to leading institutes across US, Japan,…
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