Bacterial enzyme linked to heart complications in pneumonia
Pneumonia is a disease that burdens the healthcare system with more that 1.2 million emergency room visits each…
AlphaFold Database Structure Extractor: a web server and API to download AlphaFold structures using common protein accessions | BMC Bioinformatics
Background The AlphaFoldDB Structure Extractor (https://project.iith.ac.in/sharmaglab/alphafoldextractor/) is an open-access web server and API toolkit designed to facilitate the…
Microbial and seminal traces of sexual intercourse and forensic implications | Microbiome
Isala cohort cross-sectional study The Isala citizen-science project (https://isala.be/en/) was approved by the Ethical Committee of the Antwerp…
A unified catalog of 14,062 microbial species reference genomes provides new insight into the gut microbiota in high-altitude mammals | Microbiome
Zhang Z, Xu D, Wang L, Hao J, Wang J, Zhou X, et al. Convergent evolution of rumen…
AI chat box helps investigate complex biology in English language
Using sophisticated RNA sequencing technology, biomedical researchers can measure the activity of our genes across millions of single…
Massive cross-ancestry study explains why obesity risks differ around the world
By analyzing genetic data from more than 800,000 individuals across six ancestries, researchers have identified previously unknown obesity…
Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome | Microbiome
Addison S, Armstrong C, Wigley K, Hartley R, Wakelin S. What matters most? Assessment of within-canopy factors influencing…
High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons | Microbiome
Song S, Liu Y, Wang NR, Haney CH. Mechanisms in plant-microbiome interactions: lessons from model systems. Curr Opin…
Natural sex reversal imparts permanent compositional changes to the swamp eel gonadal microbiome | Microbiome
Fish maintenance and trial design The sourcing of swamp eel and the rearing procedures employed in this study…
ParaRef: a decontaminated reference database for parasite detection in ancient and modern metagenomic datasets | Genome Biology
Blake DP, Betson M. One health: parasites and beyond. Parasitology. 2017;144:1–6. PubMed Google Scholar Coulter JBS. Global importance…
iNOME-seq: in vivo simultaneous genome-wide mapping of chromatin accessibility, nucleosome positioning, DNA-binding protein sites, and DNA methylation in Arabidopsis | Genome Biology
Plant lines and growth conditions The plant lines used in this study were derived from A. thaliana wild-type…
MultiModalGraphics: an R package for graphical integration of multi-omics datasets | BMC Bioinformatics
MultiModalGraphics is an R/Bioconductor package that leverages object-oriented S4 classes to visualize multimodal biological data with embedded statistical…