Plant Genetics and Genomics - Ireland News Beep

Natural selection exerted by historical coronavirus epidemic(s): comparative genetic analysis in China Kadoorie Biobank and UK Biobank | BMC Genomics

October 21, 2025

AppendixMethodsStatistics and reproducibility The details of each analysis are outlined in the methods section and all of the…

GGenetics

SPAmix: a scalable, accurate, and universal analysis framework for large-scale genetic association studies in admixed populations | Genome Biology

October 16, 2025

Model residuals of linear regression and logistic regression Linear regression and logistic regression are regular models to fit…

GGenetics

Genetic variation and genome-enabled selection of white lupin for key seed quality traits | BMC Genomics

October 16, 2025

Foyer CH, Lam H-M, Nguyen HT, Siddique KHM, Varshney RK, Colmer TD, et al. Neglecting legumes has compromised…

GGenetics

A novel gene expression stability metric to unveil homeostasis and regulation | Genome Biology

October 10, 2025

K-proportion and gene homeostasis Z-Index identify regulatory genes As cells of the same type and in the same…

TTechnology

The genetic influence of sex on gene expression for blood in pigs | BMC Genomics

October 9, 2025

Data summary We collected 386 blood samples with matched genotype and gene expression data from the PigGTEx project…

GGenetics

Genomic predictions for growth and feed efficiency traits in a duck breeding population | BMC Genomics

October 8, 2025

Animal population and phenotype data This study used a breeding population of Zhongxin white duck (a commercial breed…

GGenetics

Incorporating additive genetic effects and linkage disequilibrium information to discover gene-environment interactions using BV-LDER-GE | Genome Biology

October 3, 2025

Model overview We consider the following model to incorporate both additive and interaction effects: $${Y}_{i}={\sum }_{j=1}^{M}{G}_{ji}{\beta }_{j}+{\sum }_{j=1}^{M}{S}_{ji}{\gamma…

GGenetics

Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

October 3, 2025

Preparation of preliminary data In all samples, the proportion of clean reads was higher than 99.5% (Table S2),…

SScience

Chromosome-level genome assembly for Sichuan taimen (Hucho bleekeri) reveals the extraordinary tandem repeat proportions and its persistent population shrinkage | BMC Genomics

September 26, 2025

Wang K, Zhang SH, Wang DQ, Wu JM, Wang CY, Wei QW. Conservation genetics assessment and phylogenetic relationships…

SScience

Orogeny shapes the diversification of an ancient and relict spider family (Hypochilidae), with the stepwise uplift of the Qinghai-Tibetan plateau driving the radiation of Asian lineages | BMC Genomics

September 26, 2025

Parsons PA. Environments and evolution: interactions between stress, resource inadequacy and energetic efficiency. Biol Rev Camb Philos Soc.…

SScience

Genome-wide analysis of the AP2/ERF transcription factor superfamily in perennial ryegrass | BMC Genomics

September 24, 2025

Identification of AP2/ERF family in perennial ryegrass Firstly, we obtained 189 candidate genes of the AP2/ERF family through…

GGenetics

Fueling chromosomal gene diversification and artificial evolution with CRISPR | Genome Biology

September 23, 2025

Wilson DS, Keefe AD. Random mutagenesis by PCR. Curr Protoc Mol Biol. 2001;51:8–3. Google Scholar Reetz MT, Wu…