{"id":632329,"date":"2026-09-22T10:08:13","date_gmt":"2026-09-22T10:08:13","guid":{"rendered":"https:\/\/www.newsbeep.com\/ie\/632329\/"},"modified":"2026-09-22T10:08:13","modified_gmt":"2026-09-22T10:08:13","slug":"hows-your-gut-microbiome-how-to-spot-trouble-in-the-second-brain-the-irish-times","status":"publish","type":"post","link":"https:\/\/www.newsbeep.com\/ie\/632329\/","title":{"rendered":"How\u2019s your gut microbiome? How to spot trouble in the \u2018second brain\u2019 \u2013 The Irish Times"},"content":{"rendered":"<p class=\"c-paragraph paywall \">The impact trillions of microbes living inside the gut have on our health, both physical and mental, is one of the fastest growing areas of research.<\/p>\n<p class=\"c-paragraph paywall \">Global increases in bowel disorders have put the spotlight on complex interactions between the gut microbiome and its human host. Maintaining a balance between \u201cgood\u201d and \u201cbad\u201d bacteria within is vital for wellbeing, to prevent damaging microbes going rogue.<\/p>\n<p class=\"c-paragraph paywall \">Early-onset colorectal <a href=\"https:\/\/www.irishtimes.com\/tags\/cancer\/\" target=\"_self\" rel=\"nofollow noopener\" title=\"https:\/\/www.irishtimes.com\/tags\/cancer\/\">cancer<\/a> is a particular concern, as in the US it has become the leading cause of cancer death in men aged 20-49 and the second-leading cause in women aged 20-49. In Ireland, the incidence of colorectal cancer in the under-50s has almost doubled over the last 25 years, with one in 10 diagnoses now in someone under 50.<\/p>\n<p class=\"c-paragraph paywall \">Here, in consultation with Prof Sudipto Das, associate professor and principal investigator at <a href=\"https:\/\/www.irishtimes.com\/tags\/rcsi\/\" target=\"_self\" rel=\"nofollow noopener\" title=\"https:\/\/www.irishtimes.com\/tags\/rcsi\/\">RCSI<\/a>, we look at gut health and signs that all may not be well. Das is one of the contributors to a MyHealth RCSI podcast and video dealing with gut health, to be released this week (Gut Health and You will be available from September 24th. See <a href=\"https:\/\/rcsi.com\" target=\"_self\" rel=\"nofollow noopener\" title=\"https:\/\/rcsi.com\">rcsi.com<\/a>)<\/p>\n<p>What is the gut microbiome?<\/p>\n<p class=\"c-paragraph paywall \">It is an individualised ecosystem populated by bacterial, viral and fungal species. These species  influence different body functions, including the immune, endocrine and nervous systems, as well as digestion. Genes, age, environmental and lifestyle factors all shape the composition of the microbiome. A key to gut health is nurturing the \u201cgood\u201d bacteria \u2013 we feed them and they benefit us \u2013 while also trying to guard against overgrowth of \u201cbad\u201d bacteria.<\/p>\n<p class=\"c-paragraph paywall \">When the balance goes askew, with beneficial bacteria decreasing and harmful bacteria increasing, it leads to \u201cdysbiosis\u201d, which is linked to various diseases. But the cause and effect of dysbiosis is still under research. For instance, we know chronic stress is bad for gut health, as is the inflammation it causes or exacerbates, but \u201cwe still don\u2019t have proof that stress directly causes bowel cancer\u201d, says Das.<\/p>\n<p>How do we feed the gut well?<\/p>\n<p class=\"c-paragraph paywall \">Eat plenty of fibre for a start. Adults should aim for 25-35g a day, yet about 80 per cent of people in Ireland fall well short of that. Fibre nourishes the beneficial microbes as food passes through the bowel; it reduces inflammation and supports the immune system.<\/p>\n<p class=\"c-paragraph paywall \">A mix of soluble fibre and insoluble fibre is recommended. The former, found in foods such as oats, beans, berries, carrots and chia seeds, helps to slow digestion and  reduce \u201cbad\u201d cholesterol. Insoluble fibre, contained in foods such as brown rice, leafy greens, cauliflower and fruit with edible skins, adds bulk to the stool and quickens its passage through the system.<\/p>\n<p class=\"c-paragraph paywall \">Also make sure you are well hydrated. Drinking water helps to keep food-waste toxins moving through the gut, as will exercise.<\/p>\n<p>What about probiotics and prebiotics?<\/p>\n<p class=\"c-paragraph paywall \">Both are important for gut health. Just to be clear, probiotics are live, \u201cgood\u201d bacteria (also yeast) in fermented foods, which help to counteract the growth of harmful bacteria in the gut. Prebiotics are high-fibre foods, such as vegetables and whole grains, that \u201cfeed\u201d the probiotics, to help them do their work.<\/p>\n<p class=\"c-paragraph b-it-article-body__interstitial-link\">[\u00a0<a aria-label=\"Open related story\" class=\"c-link\" href=\"https:\/\/www.irishtimes.com\/health\/your-wellness\/2025\/12\/09\/ultraprocessed-foods-do-they-affect-gut-health\/\" rel=\"noreferrer nofollow noopener\" target=\"_blank\">Ultraprocessed foods: Do they affect gut health?Opens in new window<\/a>\u00a0]<\/p>\n<p class=\"c-paragraph paywall \">For healthy people, a \u201cfood-first\u201d approach, getting a variety of probiotics through eating  yoghurt, kefir and sauerkraut, for instance, is reasonable, Das suggests. <\/p>\n<p>Are there consumables to avoid?<img decoding=\"async\" data-chromatic=\"ignore\" alt=\"Prof Sudipto Das, associate professor and principal investigator at RCSI\" class=\"c-image\" loading=\"lazy\" src=\"https:\/\/www.newsbeep.com\/ie\/wp-content\/uploads\/2026\/09\/DM6FW7RYH5AZ5PRM773PXADDHY.jpg\"   width=\"800\" height=\"571\"\/>Prof Sudipto Das, associate professor and principal investigator at RCSI <\/p>\n<p class=\"c-paragraph paywall \">Those with troublesome guts are often advised to limit or avoid fermentable carbohydrates that disrupt the microbiome, collectively known as Fodmap (Fermentable Oligosaccharides, Disaccharides, Monosaccharides, and Polyols). Think lactose, excess fructose, and sugar alcohols in some artificial sweeteners, for example. Some people are more sensitive than others to fermentation of these substances by the microbes in the large intestine.<\/p>\n<p class=\"c-paragraph paywall \">Ultra-processed foods tend to contain emulsifiers and additives, which can disrupt the microbiome and gut lining. High alcohol consumption is likely to kill off beneficial bacteria, irritate the gut lining and increase permeability, also known as \u201cleaky gut\u201d.<\/p>\n<p>\u2018Leaky gut\u2019 sounds alarming, what exactly is it?<\/p>\n<p class=\"c-paragraph paywall \">It is loss of the mucosal barrier function, says Das, which leads to illness. However, the question researchers are trying to answer is does the leaky gut come first, causing damage to the microbes within, or do bacterial changes in the gut weaken the barrier? <\/p>\n<p class=\"c-paragraph paywall \">There is \u201ccrosstalk\u201d between the host cells and the microbial species, which is really important, he says, to maintain normal microbiome. \u201cWhen the leaky gut happens, this crosstalk gets imbalanced. Because it is a crosstalk, whatever is happening to the bacteria will obviously consequentially have an impact on the host itself.\u201d<\/p>\n<p>What are outward signs of trouble within?<\/p>\n<p class=\"c-paragraph paywall \">Signs of good gut health include comfortable digestion; regular and easy bowel movements; minimal bloating; no excessive gas. A deviation from those might indicate all is not well. <\/p>\n<p class=\"c-paragraph paywall \">Any sudden change in bowel movements, which then lasts for a prolonged period, is a concern that should be brought to a GP without delay. Blood in the stool is also a red flag.<\/p>\n<p class=\"c-paragraph b-it-article-body__interstitial-link\">[\u00a0<a aria-label=\"Open related story\" class=\"c-link\" href=\"https:\/\/www.irishtimes.com\/science\/2025\/08\/21\/could-vagus-nerve-stimulation-be-used-to-treat-obesity-alzheimers-and-bowel-disorders\/\" rel=\"noreferrer nofollow noopener\" target=\"_blank\">Could vagus nerve stimulation be used to treat obesity, Alzheimer\u2019s and bowel disorders?Opens in new window<\/a>\u00a0]<\/p>\n<p class=\"c-paragraph paywall \">The symptoms could indicate any one of a number of illnesses, including irritable bowel syndrome (IBS), or inflammatory bowel disease (IBD) \u2013 such as Crohn\u2019s disease or colitis, or sometimes cancer.<\/p>\n<p>Are  IBS and IBD as similar as their acronyms suggest?<img decoding=\"async\" data-chromatic=\"ignore\" alt=\"Dr Orlaith Kelly, consultant gastroenterologist at Connolly Hospital, Dublin.\" class=\"c-image\" loading=\"lazy\" src=\"https:\/\/www.newsbeep.com\/ie\/wp-content\/uploads\/2026\/09\/NJUUPVXEYNENNFAEEQXE6T2INQ.png\"   width=\"400\" height=\"507\"\/>Dr Orlaith Kelly, consultant gastroenterologist at Connolly Hospital, Dublin. <\/p>\n<p class=\"c-paragraph paywall \">No \u2013 they\u2019re two distinct and quite different conditions affecting the gastrointestinal tract, says Dr Orlaith Kelly, consultant gastroenterologist  at Connolly Hospital, Dublin, and senior lecturer at the RCSI.<\/p>\n<p class=\"c-paragraph paywall \">IBS is far more common \u2013 affecting about one in 10 people in Ireland during their lifetime \u2013 and it is a functional digestive disorder. \u201cWhat that means is that it doesn\u2019t limit your life; it doesn\u2019t cause damage to the gut, but can cause quite severe symptoms, which definitely can alter your quality of life if they\u2019re not dealt with,\u201d she says on the RCSI\u2019s new podcast. Symptoms include diarrhoea, cramping and constipation. The treatment is mainly diet, medication,  and managing stress and lifestyle. <\/p>\n<p class=\"c-paragraph paywall \">IBD, in contrast, is a digestive, inflammatory condition with genetic, environmental, and immune components. While onset is often between age 15 to 35, it can happen at any stage in life. <\/p>\n<p class=\"c-paragraph paywall \">\u201cThis does cause damage to the digestive system,\u201d she says. IBD is an umbrella term for a number of disorders, the most common of which are ulcerative colitis and Crohn\u2019s disease. These certainly alter the quality of life for the approximately 40,000 people living with such conditions in Ireland, which has one of the highest rates of IBD in Europe. They also have a significant impact on health outcomes, says Kelly. <\/p>\n<p class=\"c-paragraph b-it-article-body__interstitial-link\">[\u00a0<a aria-label=\"Open related story\" class=\"c-link\" href=\"https:\/\/www.irishtimes.com\/health\/your-wellness\/2025\/01\/23\/the-fibre-phenomenon-30-easy-ways-to-get-your-fill-of-this-life-changing-nutrient\/\" rel=\"noreferrer nofollow noopener\" target=\"_blank\">The fibre phenomenon: 30 easy ways to get your fill of this life-changing nutrientOpens in new window<\/a>\u00a0]<\/p>\n<p class=\"c-paragraph paywall \">In  earlier decades, IBD would have caused deaths. While that is much less common with modern treatment, it is still likely to involve hospital visits, often surgery in the case of Crohn\u2019s, and serious outcomes can include deep inflammation, blockages and malnutrition.<\/p>\n<p>Does a genetic link explain higher figures for IBD in Ireland?<\/p>\n<p class=\"c-paragraph paywall \">There is a genetic link to increased susceptibility to IBD. However, it\u2019s complex because of the interaction between genes and the environment, says Das. Cases are rising in countries that have relatively recently become more industrialised and are adopting a westernised diet.<\/p>\n<p class=\"c-paragraph paywall \">Incidence is rising in Ireland, particularly among children, says Kelly, but that is mirrored across Europe. However, a caveat for all of this is that \u201cour figures probably aren\u2019t accurate because we don\u2019t have a national database. This is based on literature and ad hoc data.\u201d<\/p>\n<p>What about early-onset bowel cancer?<\/p>\n<p class=\"c-paragraph paywall \">Early-onset cancer of all types are on the rise globally, says Das, citing a general 79 per cent increase between 1990 and 2019.<\/p>\n<p class=\"c-paragraph paywall \">\u201cI think bowel cancer came into the limelight much faster, compared with other cancer types.\u201d Many lifestyle factors, often interlinked, have been studied extensively and associated with increased early-onset cancer. These include rising obesity, wider consumption of processed food, lack of fibre intake, sedentary behaviour, alcohol and smoking.<\/p>\n<p class=\"c-paragraph paywall \">Genetics cannot explain a shift of that speed in cancer rates, says Das, but his lab is studying the impact of \u201cepigenetics\u201d. These are chemical modifications that happen  to a person\u2019s DNA, he explains. It doesn\u2019t change the structure of the DNA but changes the message it codes for. While there is crosstalk between environment and genetics, environmental factors have a much bigger impact on these epigenetic changes.<\/p>\n<p><img decoding=\"async\" data-chromatic=\"ignore\" alt=\"The gut has a number of neurons that connect with the brain, which governs functions such as mucus production, digestion and gut movement.&#10;'It&#x2019;s not just the brain telling the gut what to do,' says Das. 'The gut also can message back.'\" class=\"c-image\" loading=\"lazy\" src=\"https:\/\/www.newsbeep.com\/ie\/wp-content\/uploads\/2026\/09\/MFJZBOWZNZHU3MDTWC63GUJDSA.jpg\"   width=\"800\" height=\"583\"\/>The gut has a number of neurons that connect with the brain, which governs functions such as mucus production, digestion and gut movement.<br \/>\n&#8216;It\u2019s not just the brain telling the gut what to do,&#8217; says Das. &#8216;The gut also can message back.&#8217; <\/p>\n<p class=\"c-paragraph paywall \">The question is, if there are widespread environmental or lifestyle changes within a population, how does that affect their epigenome, which is effectively a control panel for the DNA?<\/p>\n<p class=\"c-paragraph paywall \">Das is leading research into what happens to specific species of bacteria that are being associated with early-onset colorectal cancer, as opposed to late onset, and what they do to the actual cells in the bowel. His lab is trying to decipher the molecular changes.<\/p>\n<p class=\"c-paragraph paywall \">This is \u201cto allow us to understand what exactly happens when some of these harmful bacteria, which typically are not supposed to be abundant in the gut, suddenly go up. That then also allows us to develop corrective measures, not just to reduce the amount of bacteria, but also to correct what is going on when your own gut cells go awry essentially.\u201d<\/p>\n<p>Could this lead to earlier interventions?<\/p>\n<p class=\"c-paragraph paywall \">The question of whether testing for abundance of the bacteria associated with early-onset colorectal cancer could be a way of identifying higher-risk patients is being looked at, says Das.<\/p>\n<p class=\"c-paragraph b-it-article-body__interstitial-link\">[\u00a0<a aria-label=\"Open related story\" class=\"c-link\" href=\"https:\/\/www.irishtimes.com\/health\/your-family\/2024\/08\/13\/ibd-i-started-the-whole-series-of-really-mortifying-really-embarrassing-experiences\/\" rel=\"noreferrer nofollow noopener\" target=\"_blank\">IBD: \u2018I\u2019ve known people who have been nervous to leave their house\u2019Opens in new window<\/a>\u00a0]<\/p>\n<p class=\"c-paragraph paywall \">It is part of an AI-assisted movement towards personalised medicine, in which testing of an individual\u2019s gut microbiome would predict their likely response to certain treatments, enabling informed tailoring of medication, rather than needing to work on a trial-and-error basis.<\/p>\n<p>Is the national bowel cancer screening programme adapting to early-onset developments?<\/p>\n<p class=\"c-paragraph paywall \">BowelScreen currently invites men and women aged 57 to 71 to take a free, at-home screening test. In April this year,  Minister for Health Jennifer Carroll MacNeill approved a recommendation from the National Screening Advisory Committee to include people aged 50-54.<\/p>\n<p class=\"c-paragraph paywall \">\u201cThis builds upon the existing ambition to extend the programme from 55- to 74-year-olds,\u201d explains a Department of Health spokesman. The full extension to those aged 50 to 74 will take some years to complete, \u201cto ensure that there is sufficient capacity in the health system to diagnose and treat those who receive a positive screening result in a timely manner\u201d.<\/p>\n<p class=\"c-paragraph paywall \">However, population-based screening programmes are for people without symptoms, he stresses, and anyone with concerns should contact a medical professional. Das believes there is a case for lowering age eligibility further, to 45, as that is the recommended age in the US at which to start routine screening.<\/p>\n<p>Why is the gut sometimes referred to as \u2018the second brain\u2019?<\/p>\n<p class=\"c-paragraph paywall \">The gut has a number of different neurons that connect with the brain, which governs functions such as mucus production, digestion and gut movement.<\/p>\n<p class=\"c-paragraph paywall \">However, \u201cit\u2019s not just the brain telling the gut what to do\u201d, says Das. \u201cThe gut also can message back.\u201d<\/p>\n<p class=\"c-paragraph paywall \">It is on this basis that researchers worldwide are looking at a link between microbiome changes and the development of neurological conditions and decline, such as Alzheimer\u2019s.<\/p>\n<p class=\"c-paragraph paywall \">\u201cYour gut and the brain are in a constant two-way conversation. Mostly it happens through a particular nerve called the vagus nerve.\u201d<\/p>\n<p class=\"c-paragraph paywall \">As we know, there are trillions of microbes, he adds, so while this communication is real, \u201cit is far more nuanced than \u2018your gut is your second brain\u2019.\u201d<\/p>\n","protected":false},"excerpt":{"rendered":"The impact trillions of microbes living inside the gut have on our health, both physical and mental, is&hellip;\n","protected":false},"author":2,"featured_media":632330,"comment_status":"","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[10],"tags":[258,103,12875,61,60,79319],"class_list":["post-632329","post","type-post","status-publish","format-standard","has-post-thumbnail","category-health","tag-cancer","tag-health","tag-health-wellness","tag-ie","tag-ireland","tag-rcsi"],"_links":{"self":[{"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/posts\/632329","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/comments?post=632329"}],"version-history":[{"count":0,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/posts\/632329\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/media\/632330"}],"wp:attachment":[{"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/media?parent=632329"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/categories?post=632329"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.newsbeep.com\/ie\/wp-json\/wp\/v2\/tags?post=632329"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}