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Browsing Tag

Bioinformatics

63 posts
SScience
OMetaNet: an efficient hybrid deep learning model based on multimodal data fusion and contrastive learning for predicting 2ʹ-O-methylation sites in human RNA | BMC Bioinformatics
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AlphaFold Database Structure Extractor: a web server and API to download AlphaFold structures using common protein accessions | BMC Bioinformatics

  • November 25, 2025
Background The AlphaFoldDB Structure Extractor (https://project.iith.ac.in/sharmaglab/alphafoldextractor/) is an open-access web server and API toolkit designed to facilitate the…
BBusiness
OMetaNet: an efficient hybrid deep learning model based on multimodal data fusion and contrastive learning for predicting 2ʹ-O-methylation sites in human RNA | BMC Bioinformatics
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OMetaNet: an efficient hybrid deep learning model based on multimodal data fusion and contrastive learning for predicting 2ʹ-O-methylation sites in human RNA | BMC Bioinformatics

  • November 24, 2025
Arzumanian VA, Dolgalev GV, Kurbatov IY, Kiseleva OI, Poverennaya EV. Epitranscriptome: review of top 25 most-studied RNA modifications.…
SScience
Microbial and seminal traces of sexual intercourse and forensic implications | Microbiome
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Microbial and seminal traces of sexual intercourse and forensic implications | Microbiome

  • November 20, 2025
Isala cohort cross-sectional study The Isala citizen-science project (https://isala.be/en/) was approved by the Ethical Committee of the Antwerp…
TTechnology
A unified catalog of 14,062 microbial species reference genomes provides new insight into the gut microbiota in high-altitude mammals | Microbiome
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A unified catalog of 14,062 microbial species reference genomes provides new insight into the gut microbiota in high-altitude mammals | Microbiome

  • November 20, 2025
Zhang Z, Xu D, Wang L, Hao J, Wang J, Zhou X, et al. Convergent evolution of rumen…
BBusiness
Uli-epic: profiling RNA modifications from ultra-low input samples | Genome Biology
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Uli-epic: profiling RNA modifications from ultra-low input samples | Genome Biology

  • November 11, 2025
McCown PJ, Ruszkowska A, Kunkler CN, Breger K, Hulewicz JP, Wang MC, et al. Naturally occurring modified ribonucleosides.…
SScience
Emerging crops and plant growth-promoting bacteria (PGPB): a synergistic approach to climate-resilient agriculture | Microbiome
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Emerging crops and plant growth-promoting bacteria (PGPB): a synergistic approach to climate-resilient agriculture | Microbiome

  • November 6, 2025
FAO. The State of Food Security and Nutrition in the World 2022. FAO; IFAD; UNICEF ; WFP; WHO, editor.…
HHealth
Scientists uncover how amino acids stabilize proteins in solution
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Undergraduate researcher uncovers molecular secrets of HPV’s cancer-causing mechanisms

  • November 1, 2025
When Sean Fletcher walked into Sam Biswas’ Medical and Molecular Sciences (MMSC) lab at the University of Delaware…
HHealth
Study: Discovery of obesity genes through cross-ancestry analysis. Image Credit: CI Photos / Shutterstock
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Massive cross-ancestry study explains why obesity risks differ around the world

  • October 31, 2025
By analyzing genetic data from more than 800,000 individuals across six ancestries, researchers have identified previously unknown obesity…
SScience
Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome | Microbiome
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome | Microbiome

  • October 30, 2025
Addison S, Armstrong C, Wigley K, Hartley R, Wakelin S. What matters most? Assessment of within-canopy factors influencing…
TTechnology
High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons | Microbiome
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High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons | Microbiome

  • October 28, 2025
Song S, Liu Y, Wang NR, Haney CH. Mechanisms in plant-microbiome interactions: lessons from model systems. Curr Opin…
SScience
Natural sex reversal imparts permanent compositional changes to the swamp eel gonadal microbiome | Microbiome
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Natural sex reversal imparts permanent compositional changes to the swamp eel gonadal microbiome | Microbiome

  • October 24, 2025
Fish maintenance and trial design The sourcing of swamp eel and the rearing procedures employed in this study…
BBusiness
Unlocking the regulatory code of RNA: launching the Human RNome Project | Genome Biology
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Unlocking the regulatory code of RNA: launching the Human RNome Project | Genome Biology

  • October 24, 2025
The Human RNome Project aims to ensure consistent and reproducible outcomes in RNA sequencing and modification studies by…
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