Computer Appl. in Life Sciences

OMetaNet: an efficient hybrid deep learning model based on multimodal data fusion and contrastive learning for predicting 2ʹ-O-methylation sites in human RNA | BMC Bioinformatics

November 25, 2025

Background The AlphaFoldDB Structure Extractor (https://project.iith.ac.in/sharmaglab/alphafoldextractor/) is an open-access web server and API toolkit designed to facilitate the…

BBusiness

November 24, 2025

Arzumanian VA, Dolgalev GV, Kurbatov IY, Kiseleva OI, Poverennaya EV. Epitranscriptome: review of top 25 most-studied RNA modifications.…

SScience

MultiModalGraphics: an R package for graphical integration of multi-omics datasets | BMC Bioinformatics

October 21, 2025

MultiModalGraphics is an R/Bioconductor package that leverages object-oriented S4 classes to visualize multimodal biological data with embedded statistical…

TTechnology

Topology-aware functional similarity: integrating extended neighborhoods via exponential attenuation | BMC Bioinformatics

October 21, 2025

Experiment datasets This study systematically evaluates protein-protein interaction (PPI) networks from four model organisms: Saccharomyces cerevisiae, Arabidopsis thaliana,…

GGenetics

SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics

October 14, 2025

Software architecture SAGPEK mainly processes Sanger sequencing results of two kinds of samples: diploids such as humans and…

BBusiness

Boosting K-nearest neighbor regression performance for longitudinal data through a novel learning approach | BMC Bioinformatics

September 30, 2025

Variable-trajectory Let \(y_{it} \in {\mathbb{R}}\) denote the observed response value for the subject \(i \in \left\{ {1, \ldots…