Uli-epic: profiling RNA modifications from ultra-low input samples | Genome Biology
McCown PJ, Ruszkowska A, Kunkler CN, Breger K, Hulewicz JP, Wang MC, et al. Naturally occurring modified ribonucleosides.…
Evolutionary insights from the mitochondrial genomes of invasive scale insects (Hemiptera: Coccomorpha): large-scale transfer RNA gene truncations and tandem repeat-driven intraspecific gene rearrangements | BMC Genomics
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Reconstruction and application of a genome-scale metabolic model for Streptococcus suis | BMC Genomics
The reconstruction and characteristics of the genome-scale metabolic model for Streptococcus suis Streptococcus suis SC19 strain is a…
Next-generation sequencing, assembly, annotation, and phylogenomic analysis of the complete mitochondrial genome of the painted lady butterfly Vanessa cardui (Linnaeus, 1758) (Insecta: Lepidoptera: Nymphalidae) | BMC Genomics
Lane N, Power. Sex, Suicide: Mitochondria and the Meaning of Life. 2nd edition. Oxford, UK: Oxford University Press;…
Prophage landscape in Enterococcus faecium: diversity, resistance genes, virulence factors, and endolysin profiling | BMC Genomics
Wei Y, Palacios Araya D, Palmer KL. Enterococcus faecium: evolution, adaptation, pathogenesis and emerging therapeutics. Nat Rev Microbiol.…
Unlocking the regulatory code of RNA: launching the Human RNome Project | Genome Biology
The Human RNome Project aims to ensure consistent and reproducible outcomes in RNA sequencing and modification studies by…
Evolutionary diversification and expressional profile of adrenergic receptors in the Pacific oyster Crassostrea gigas | BMC Genomics
Motiejunaite J, Amar L, Vidal-Petiot E. Adrenergic receptors and cardiovascular effects of catecholamines. Ann Endocrinol. 2021;82:193–7. Google Scholar …
iNOME-seq: in vivo simultaneous genome-wide mapping of chromatin accessibility, nucleosome positioning, DNA-binding protein sites, and DNA methylation in Arabidopsis | Genome Biology
Plant lines and growth conditions The plant lines used in this study were derived from A. thaliana wild-type…
Natural selection exerted by historical coronavirus epidemic(s): comparative genetic analysis in China Kadoorie Biobank and UK Biobank | BMC Genomics
AppendixMethodsStatistics and reproducibility The details of each analysis are outlined in the methods section and all of the…
SPAmix: a scalable, accurate, and universal analysis framework for large-scale genetic association studies in admixed populations | Genome Biology
Model residuals of linear regression and logistic regression Linear regression and logistic regression are regular models to fit…
Genetic variation and genome-enabled selection of white lupin for key seed quality traits | BMC Genomics
Foyer CH, Lam H-M, Nguyen HT, Siddique KHM, Varshney RK, Colmer TD, et al. Neglecting legumes has compromised…
A novel gene expression stability metric to unveil homeostasis and regulation | Genome Biology
K-proportion and gene homeostasis Z-Index identify regulatory genes As cells of the same type and in the same…