{"id":73536,"date":"2025-10-14T08:02:08","date_gmt":"2025-10-14T08:02:08","guid":{"rendered":"https:\/\/www.newsbeep.com\/il\/73536\/"},"modified":"2025-10-14T08:02:08","modified_gmt":"2025-10-14T08:02:08","slug":"inbreeding-does-not-reduce-major-histocompatibility-complex-diversity-in-the-banded-mongoose-bmc-ecology-and-evolution","status":"publish","type":"post","link":"https:\/\/www.newsbeep.com\/il\/73536\/","title":{"rendered":"Inbreeding does not reduce major histocompatibility complex diversity in the banded mongoose | BMC Ecology and Evolution"},"content":{"rendered":"<p class=\"c-article-references__text\" id=\"ref-CR1\">Bitarello BD, De Filippo C, Teixeira JC, Schmidt JM, Kleinert P, Meyer D, Andres AM. Signatures of long-term balancing selection in human genomes. Genome Biol Evol. 2018. <a href=\"https:\/\/doi.org\/10.1093\/gbe\/evy054\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/gbe\/evy054\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/gbe\/evy054<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/gbe\/evy054\" data-track-item_id=\"10.1093\/gbe\/evy054\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fgbe%2Fevy054\" aria-label=\"Article reference 1\" data-doi=\"10.1093\/gbe\/evy054\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29608730\" aria-label=\"PubMed reference 1\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5952967\" aria-label=\"PubMed Central reference 1\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 1\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Signatures%20of%20long-term%20balancing%20selection%20in%20human%20genomes&amp;journal=Genome%20Biol%20Evol&amp;doi=10.1093%2Fgbe%2Fevy054&amp;publication_year=2018&amp;author=Bitarello%2CBD&amp;author=Filippo%2CC&amp;author=Teixeira%2CJC&amp;author=Schmidt%2CJM&amp;author=Kleinert%2CP&amp;author=Meyer%2CD&amp;author=Andres%2CAM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR2\">Piertney SB, Oliver MK. The evolutionary ecology of the major histocompatibility complex. Heredity. 2006;96(1):7\u201321.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=16094301\" aria-label=\"PubMed reference 2\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 2\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=The%20evolutionary%20ecology%20of%20the%20major%20histocompatibility%20complex&amp;journal=Heredity&amp;volume=96&amp;issue=1&amp;pages=7-21&amp;publication_year=2006&amp;author=Piertney%2CSB&amp;author=Oliver%2CMK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR3\">Ebert D, Fields PD. Host\u2013parasite co-evolution and its genomic signature. Nat Rev Genet. 2020;21(12):754\u201368.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=32860017\" aria-label=\"PubMed reference 3\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 3\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Host%E2%80%93parasite%20co-evolution%20and%20its%20genomic%20signature&amp;journal=Nat%20Rev%20Genet&amp;volume=21&amp;issue=12&amp;pages=754-68&amp;publication_year=2020&amp;author=Ebert%2CD&amp;author=Fields%2CPD\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR4\">Kaufman J. Unfinished business: evolution of the MHC and the adaptive immune system of jawed vertebrates. Annu Rev Immunol. 2018. <a href=\"https:\/\/doi.org\/10.1146\/annurev-immunol-051116-052450\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1146\/annurev-immunol-051116-052450\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1146\/annurev-immunol-051116-052450<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1146\/annurev-immunol-051116-052450\" data-track-item_id=\"10.1146\/annurev-immunol-051116-052450\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1146%2Fannurev-immunol-051116-052450\" aria-label=\"Article reference 4\" data-doi=\"10.1146\/annurev-immunol-051116-052450\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29677478\" aria-label=\"PubMed reference 4\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 4\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Unfinished%20business%3A%20evolution%20of%20the%20MHC%20and%20the%20adaptive%20immune%20system%20of%20jawed%20vertebrates&amp;journal=Annu%20Rev%20Immunol&amp;doi=10.1146%2Fannurev-immunol-051116-052450&amp;publication_year=2018&amp;author=Kaufman%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR5\">Klein J. Natural history of the major histocompatibility complex. New York: Wiley; 1986.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 5\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Natural%20history%20of%20the%20major%20histocompatibility%20complex&amp;publication_year=1986&amp;author=Klein%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR6\">Neefjes J, Jongsma MLM, Paul P, Bakke O. Towards a systems Understanding of MHC class I and MHC class II antigen presentation. Nat Rev Immunol. 2011;11(12):823\u201336.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22076556\" aria-label=\"PubMed reference 6\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 6\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Towards%20a%20systems%20Understanding%20of%20MHC%20class%20I%20and%20MHC%20class%20II%20antigen%20presentation&amp;journal=Nat%20Rev%20Immunol&amp;volume=11&amp;issue=12&amp;pages=823-36&amp;publication_year=2011&amp;author=Neefjes%2CJ&amp;author=Jongsma%2CMLM&amp;author=Paul%2CP&amp;author=Bakke%2CO\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR7\">Braud VM, Allan DS, McMichael AJ. Functions of nonclassical MHC and non-MHC-encoded class I molecules. Curr Opin Immunol. 1999. <a href=\"https:\/\/doi.org\/10.1016\/S0952-7915(99)80018-1\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1016\/S0952-7915(99)80018-1\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1016\/S0952-7915(99)80018-1<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1016\/S0952-7915(99)80018-1\" data-track-item_id=\"10.1016\/S0952-7915(99)80018-1\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1016%2FS0952-7915%2899%2980018-1\" aria-label=\"Article reference 7\" data-doi=\"10.1016\/S0952-7915(99)80018-1\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10047540\" aria-label=\"PubMed reference 7\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 7\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Functions%20of%20nonclassical%20MHC%20and%20non-MHC-encoded%20class%20I%20molecules&amp;journal=Curr%20Opin%20Immunol&amp;doi=10.1016%2FS0952-7915%2899%2980018-1&amp;publication_year=1999&amp;author=Braud%2CVM&amp;author=Allan%2CDS&amp;author=McMichael%2CAJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR8\">Alfonso C, Karlsson L. Nonclassical MHC class II molecules. Annu Rev Immunol. 2000. <a href=\"https:\/\/doi.org\/10.1146\/annurev.immunol.18.1.113\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1146\/annurev.immunol.18.1.113\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1146\/annurev.immunol.18.1.113<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1146\/annurev.immunol.18.1.113\" data-track-item_id=\"10.1146\/annurev.immunol.18.1.113\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1146%2Fannurev.immunol.18.1.113\" aria-label=\"Article reference 8\" data-doi=\"10.1146\/annurev.immunol.18.1.113\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10837054\" aria-label=\"PubMed reference 8\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 8\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Nonclassical%20MHC%20class%20II%20molecules&amp;journal=Annu%20Rev%20Immunol&amp;doi=10.1146%2Fannurev.immunol.18.1.113&amp;publication_year=2000&amp;author=Alfonso%2CC&amp;author=Karlsson%2CL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR9\">Adams EJ, Luoma AM. The adaptable major histocompatibility complex (MHC) fold: structure and function of nonclassical and Mhc class I-like molecules. Annu Rev Immunol. 2013;31(1):529\u201361.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23298204\" aria-label=\"PubMed reference 9\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 9\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=The%20adaptable%20major%20histocompatibility%20complex%20%28MHC%29%20fold%3A%20structure%20and%20function%20of%20nonclassical%20and%20Mhc%20class%20I-like%20molecules&amp;journal=Annu%20Rev%20Immunol&amp;volume=31&amp;issue=1&amp;pages=529-61&amp;publication_year=2013&amp;author=Adams%2CEJ&amp;author=Luoma%2CAM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR10\">Saper MA, Bjorkman PJ, Wiley DC. Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 \u00c5 resolution. J Mol Biol. 1991. <a href=\"https:\/\/doi.org\/10.1016\/0022-2836(91)90567-P\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1016\/0022-2836(91)90567-P\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1016\/0022-2836(91)90567-P<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1016\/0022-2836(91)90567-P\" data-track-item_id=\"10.1016\/0022-2836(91)90567-P\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1016%2F0022-2836%2891%2990567-P\" aria-label=\"Article reference 10\" data-doi=\"10.1016\/0022-2836(91)90567-P\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=2038058\" aria-label=\"PubMed reference 10\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 10\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Refined%20structure%20of%20the%20human%20histocompatibility%20antigen%20HLA-A2%20at%202.6%20%C3%85%20resolution&amp;journal=J%20Mol%20Biol&amp;doi=10.1016%2F0022-2836%2891%2990567-P&amp;publication_year=1991&amp;author=Saper%2CMA&amp;author=Bjorkman%2CPJ&amp;author=Wiley%2CDC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR11\">Brown JH, Jardetzky TS, Gorga JC, Stern LJ, Urban RG, Strominger JL, Wiley DC. Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1. Nature. 1993. <a href=\"https:\/\/doi.org\/10.1038\/364033a0\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1038\/364033a0\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1038\/364033a0<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1038\/364033a0\" data-track-item_id=\"10.1038\/364033a0\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1038%2F364033a0\" aria-label=\"Article reference 11\" data-doi=\"10.1038\/364033a0\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=8255296\" aria-label=\"PubMed reference 11\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 11\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Three-dimensional%20structure%20of%20the%20human%20class%20II%20histocompatibility%20antigen%20HLA-DR1&amp;journal=Nature&amp;doi=10.1038%2F364033a0&amp;publication_year=1993&amp;author=Brown%2CJH&amp;author=Jardetzky%2CTS&amp;author=Gorga%2CJC&amp;author=Stern%2CLJ&amp;author=Urban%2CRG&amp;author=Strominger%2CJL&amp;author=Wiley%2CDC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR12\">Yuhki N, O\u2019Brien SJ. Nature and origin of polymorphism in feline MHC class II DRA and DRB genes. J Immunol. 1997. <a href=\"https:\/\/doi.org\/10.4049\/jimmunol.158.6.2822\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.4049\/jimmunol.158.6.2822\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.4049\/jimmunol.158.6.2822<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.4049\/jimmunol.158.6.2822\" data-track-item_id=\"10.4049\/jimmunol.158.6.2822\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.4049%2Fjimmunol.158.6.2822\" aria-label=\"Article reference 12\" data-doi=\"10.4049\/jimmunol.158.6.2822\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=9058818\" aria-label=\"PubMed reference 12\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 12\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Nature%20and%20origin%20of%20polymorphism%20in%20feline%20MHC%20class%20II%20DRA%20and%20DRB%20genes&amp;journal=J%20Immunol&amp;doi=10.4049%2Fjimmunol.158.6.2822&amp;publication_year=1997&amp;author=Yuhki%2CN&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR13\">Pierini F, Lenz TL. Divergent allele advantage at human MHC genes: signatures of past and ongoing selection. Mol Biol Evol. 2018;35(9):2145\u201358.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29893875\" aria-label=\"PubMed reference 13\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6106954\" aria-label=\"PubMed Central reference 13\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 13\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Divergent%20allele%20advantage%20at%20human%20MHC%20genes%3A%20signatures%20of%20past%20and%20ongoing%20selection&amp;journal=Mol%20Biol%20Evol&amp;volume=35&amp;issue=9&amp;pages=2145-58&amp;publication_year=2018&amp;author=Pierini%2CF&amp;author=Lenz%2CTL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR14\">Takahata N, Nei M. Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics. 1990. <a href=\"https:\/\/doi.org\/10.1093\/genetics\/124.4.967\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/genetics\/124.4.967\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/genetics\/124.4.967<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/genetics\/124.4.967\" data-track-item_id=\"10.1093\/genetics\/124.4.967\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fgenetics%2F124.4.967\" aria-label=\"Article reference 14\" data-doi=\"10.1093\/genetics\/124.4.967\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=2249764\" aria-label=\"PubMed reference 14\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC1204221\" aria-label=\"PubMed Central reference 14\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 14\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Allelic%20genealogy%20under%20overdominant%20and%20frequency-dependent%20selection%20and%20polymorphism%20of%20major%20histocompatibility%20complex%20loci&amp;journal=Genetics&amp;doi=10.1093%2Fgenetics%2F124.4.967&amp;publication_year=1990&amp;author=Takahata%2CN&amp;author=Nei%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR15\">Hughes AL, Nei M. Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. Proc Natl Acad Sci USA. 1989. <a href=\"https:\/\/doi.org\/10.1073\/pnas.86.3.958\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1073\/pnas.86.3.958\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1073\/pnas.86.3.958<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1073\/pnas.86.3.958\" data-track-item_id=\"10.1073\/pnas.86.3.958\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1073%2Fpnas.86.3.958\" aria-label=\"Article reference 15\" data-doi=\"10.1073\/pnas.86.3.958\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=2557627\" aria-label=\"PubMed reference 15\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC298586\" aria-label=\"PubMed Central reference 15\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 15\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Nucleotide%20substitution%20at%20major%20histocompatibility%20complex%20class%20II%20loci%3A%20evidence%20for%20overdominant%20selection&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;doi=10.1073%2Fpnas.86.3.958&amp;publication_year=1989&amp;author=Hughes%2CAL&amp;author=Nei%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR16\">Zinkernagel RM, Doherty PC. H 2 compatibility requirement for T cell mediated Lysis of target cells infected with lymphocytic choriomeningitis virus. Different cytotoxic T cell specificities are associated with structures coded for in H 2K or H 2D. J Exp Med. 1975. <a href=\"https:\/\/doi.org\/10.1084\/jem.141.6.1427\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1084\/jem.141.6.1427\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1084\/jem.141.6.1427<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1084\/jem.141.6.1427\" data-track-item_id=\"10.1084\/jem.141.6.1427\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1084%2Fjem.141.6.1427\" aria-label=\"Article reference 16\" data-doi=\"10.1084\/jem.141.6.1427\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=47901\" aria-label=\"PubMed reference 16\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 16\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=H%202%20compatibility%20requirement%20for%20T%20cell%20mediated%20Lysis%20of%20target%20cells%20infected%20with%20lymphocytic%20choriomeningitis%20virus.%20Different%20cytotoxic%20T%20cell%20specificities%20are%20associated%20with%20structures%20coded%20for%20in%20H%202K%20or%20H%202D&amp;journal=J%20Exp%20Med&amp;doi=10.1084%2Fjem.141.6.1427&amp;publication_year=1975&amp;author=Zinkernagel%2CRM&amp;author=Doherty%2CPC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR17\">Clarke B, Kirby DRS. Maintenance of histocompatibility polymorphisms. Nature. 1966;211(5052):999\u20131000.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=6007869\" aria-label=\"PubMed reference 17\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 17\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Maintenance%20of%20histocompatibility%20polymorphisms&amp;journal=Nature&amp;volume=211&amp;issue=5052&amp;pages=999-1000&amp;publication_year=1966&amp;author=Clarke%2CB&amp;author=Kirby%2CDRS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR18\">Nei M, Gu X, Sitnikova T. Evolution by the birth-and-death process in multigene families of the vertebrate immune system. Proc Natl Acad Sci USA. 1997;94(15):7799\u2013806.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=9223266\" aria-label=\"PubMed reference 18\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC33709\" aria-label=\"PubMed Central reference 18\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 18\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Evolution%20by%20the%20birth-and-death%20process%20in%20multigene%20families%20of%20the%20vertebrate%20immune%20system&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;volume=94&amp;issue=15&amp;pages=7799-806&amp;publication_year=1997&amp;author=Nei%2CM&amp;author=Gu%2CX&amp;author=Sitnikova%2CT\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR19\">Klein J. Origin of major histocompatibility complex polymorphism: the trans-species hypothesis. Hum Immunol. 1987;19(3):155\u201362.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=3305436\" aria-label=\"PubMed reference 19\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 19\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Origin%20of%20major%20histocompatibility%20complex%20polymorphism%3A%20the%20trans-species%20hypothesis&amp;journal=Hum%20Immunol&amp;volume=19&amp;issue=3&amp;pages=155-62&amp;publication_year=1987&amp;author=Klein%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR20\">T\u011b\u0161ick\u00fd M, Vinkler M. Trans-Species polymorphism in immune genes: general pattern or MHC-Restricted phenomenon? J Immunol Res. 2015;2015(1):838035.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=26090501\" aria-label=\"PubMed reference 20\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4458282\" aria-label=\"PubMed Central reference 20\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 20\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Trans-Species%20polymorphism%20in%20immune%20genes%3A%20general%20pattern%20or%20MHC-Restricted%20phenomenon%3F&amp;journal=J%20Immunol%20Res&amp;volume=2015&amp;issue=1&amp;publication_year=2015&amp;author=T%C4%9B%C5%A1ick%C3%BD%2CM&amp;author=Vinkler%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR21\">Aguilar A, Roemer G, Debenham S, Binns M, Garcelon D, Wayne RK. High MHC diversity maintained by balancing selection in an otherwise genetically monomorphic mammal. Proc Natl Acad Sci USA. 2004. <a href=\"https:\/\/doi.org\/10.1073\/pnas.0306582101\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1073\/pnas.0306582101\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1073\/pnas.0306582101<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1073\/pnas.0306582101\" data-track-item_id=\"10.1073\/pnas.0306582101\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1073%2Fpnas.0306582101\" aria-label=\"Article reference 21\" data-doi=\"10.1073\/pnas.0306582101\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=15340138\" aria-label=\"PubMed reference 21\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC518792\" aria-label=\"PubMed Central reference 21\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 21\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=High%20MHC%20diversity%20maintained%20by%20balancing%20selection%20in%20an%20otherwise%20genetically%20monomorphic%20mammal&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;doi=10.1073%2Fpnas.0306582101&amp;publication_year=2004&amp;author=Aguilar%2CA&amp;author=Roemer%2CG&amp;author=Debenham%2CS&amp;author=Binns%2CM&amp;author=Garcelon%2CD&amp;author=Wayne%2CRK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR22\">Castro-Prieto A, Wachter B, Sommer S. Cheetah paradigm revisited: MHC diversity in the world\u2019s largest free-ranging population. Mol Biol Evol. 2011. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msq330\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/msq330\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/msq330<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/msq330\" data-track-item_id=\"10.1093\/molbev\/msq330\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmsq330\" aria-label=\"Article reference 22\" data-doi=\"10.1093\/molbev\/msq330\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21183613\" aria-label=\"PubMed reference 22\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 22\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Cheetah%20paradigm%20revisited%3A%20MHC%20diversity%20in%20the%20world%E2%80%99s%20largest%20free-ranging%20population&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmsq330&amp;publication_year=2011&amp;author=Castro-Prieto%2CA&amp;author=Wachter%2CB&amp;author=Sommer%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR23\">Gutierrez-Espeleta GA, Hedrick PW, Kalinowski ST, Garrigan D, Boyce WM. Is the decline of desert bighorn sheep from infectious disease the result of low MHC variation? Heredity 2001, <a href=\"https:\/\/doi.org\/10.1046\/j.1365-2540.2001.00853.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1046\/j.1365-2540.2001.00853.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1046\/j.1365-2540.2001.00853.x<\/a><\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR24\">Radwan J, Biedrzycka A, Babik W. Does reduced MHC diversity decrease viability of vertebrate populations? Biol Conserv. 2010;143(3):537\u201344.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=32226082\" aria-label=\"PubMed reference 24\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 24\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Does%20reduced%20MHC%20diversity%20decrease%20viability%20of%20vertebrate%20populations%3F&amp;journal=Biol%20Conserv&amp;volume=143&amp;issue=3&amp;pages=537-44&amp;publication_year=2010&amp;author=Radwan%2CJ&amp;author=Biedrzycka%2CA&amp;author=Babik%2CW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR25\">Rao X, Hoof I, Fontaine Costa AICA, Van Baarle D, Ke\u015fmir C. HLA class I allele promiscuity revisited. Immunogenetics. 2011;63(11):691\u2013701.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21695550\" aria-label=\"PubMed reference 25\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3190086\" aria-label=\"PubMed Central reference 25\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 25\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=HLA%20class%20I%20allele%20promiscuity%20revisited&amp;journal=Immunogenetics&amp;volume=63&amp;issue=11&amp;pages=691-701&amp;publication_year=2011&amp;author=Rao%2CX&amp;author=Hoof%2CI&amp;author=Fontaine%20Costa%2CAICA&amp;author=Baarle%2CD&amp;author=Ke%C5%9Fmir%2CC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR26\">Reche PA, Reinherz EL. Definition of MHC supertypes through clustering of MHC peptide-binding repertoires. Methods in molecular biology (Clifton, NJ) 2007, <a href=\"https:\/\/doi.org\/10.1007\/978-1-60327-118-9_11\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/978-1-60327-118-9_11\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/978-1-60327-118-9_11<\/a><\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR27\">Pedersen AB, Jones KE, Nunn CL, Altizer S. Infectious diseases and extinction risk in wild mammals. Conserv Biol. 2007;21(5):1269\u201379.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=17883492\" aria-label=\"PubMed reference 27\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7202242\" aria-label=\"PubMed Central reference 27\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 27\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Infectious%20diseases%20and%20extinction%20risk%20in%20wild%20mammals&amp;journal=Conserv%20Biol&amp;volume=21&amp;issue=5&amp;pages=1269-79&amp;publication_year=2007&amp;author=Pedersen%2CAB&amp;author=Jones%2CKE&amp;author=Nunn%2CCL&amp;author=Altizer%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR28\">Crooks KR, Burdett CL, Theobald DM, Rondinini C, Boitani L. Global patterns of fragmentation and connectivity of mammalian carnivore habitat. Philosophical Trans Royal Soc B: Biol Sci. 2011;366(1578):2642\u201351.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 28\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Global%20patterns%20of%20fragmentation%20and%20connectivity%20of%20mammalian%20carnivore%20habitat&amp;journal=Philosophical%20Trans%20Royal%20Soc%20B%3A%20Biol%20Sci&amp;volume=366&amp;issue=1578&amp;pages=2642-51&amp;publication_year=2011&amp;author=Crooks%2CKR&amp;author=Burdett%2CCL&amp;author=Theobald%2CDM&amp;author=Rondinini%2CC&amp;author=Boitani%2CL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR29\">Ripple WJ, Estes JA, Beschta RL, Wilmers CC, Ritchie EG, Hebblewhite M, Berger J, Elmhagen B, Letnic M, Nelson MP. Status and ecological effects of the world\u2019s largest carnivores. Science. 2014;343(6167):1241484.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=24408439\" aria-label=\"PubMed reference 29\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 29\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Status%20and%20ecological%20effects%20of%20the%20world%E2%80%99s%20largest%20carnivores&amp;journal=Science&amp;volume=343&amp;issue=6167&amp;publication_year=2014&amp;author=Ripple%2CWJ&amp;author=Estes%2CJA&amp;author=Beschta%2CRL&amp;author=Wilmers%2CCC&amp;author=Ritchie%2CEG&amp;author=Hebblewhite%2CM&amp;author=Berger%2CJ&amp;author=Elmhagen%2CB&amp;author=Letnic%2CM&amp;author=Nelson%2CMP\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR30\">Woodroffe R. Predators and people: using human densities to interpret declines of large carnivores. Anim Conserv. 2000;3(2):165\u201373.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 30\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Predators%20and%20people%3A%20using%20human%20densities%20to%20interpret%20declines%20of%20large%20carnivores&amp;journal=Anim%20Conserv&amp;volume=3&amp;issue=2&amp;pages=165-73&amp;publication_year=2000&amp;author=Woodroffe%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR31\">Jeon Jong Y, Black Andrew N, Heenkenda Erangi J, Mularo Andrew J, Lamka Gina F, Janjua S, Br\u00fcniche-Olsen A, Bickham John W, Willoughby Janna R, DeWoody JA. Genomic diversity as a key conservation criterion: Proof-of-concept from mammalian whole-genome resequencing data. Evol Appl. 2024;17(9):e70000.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=39257570\" aria-label=\"PubMed reference 31\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC11386325\" aria-label=\"PubMed Central reference 31\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 31\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Genomic%20diversity%20as%20a%20key%20conservation%20criterion%3A%20Proof-of-concept%20from%20mammalian%20whole-genome%20resequencing%20data&amp;journal=Evol%20Appl&amp;volume=17&amp;issue=9&amp;publication_year=2024&amp;author=Jeon%20Jong%2CY&amp;author=Black%20Andrew%2CN&amp;author=Heenkenda%20Erangi%2CJ&amp;author=Mularo%20Andrew%2CJ&amp;author=Lamka%20Gina%2CF&amp;author=Janjua%2CS&amp;author=Br%C3%BCniche-Olsen%2CA&amp;author=Bickham%20John%2CW&amp;author=Willoughby%20Janna%2CR&amp;author=DeWoody%2CJA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR32\">Yuhki N, Beck T, Stephens R, Neelam B, O\u2019Brien SJ. Comparative genomic structure of human, dog, and Cat MHC: HLA, DLA, and FLA. J Hered. 2007;98(5):390\u20139.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=17675392\" aria-label=\"PubMed reference 32\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 32\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Comparative%20genomic%20structure%20of%20human%2C%20dog%2C%20and%20Cat%20MHC%3A%20HLA%2C%20DLA%2C%20and%20FLA&amp;journal=J%20Hered&amp;volume=98&amp;issue=5&amp;pages=390-9&amp;publication_year=2007&amp;author=Yuhki%2CN&amp;author=Beck%2CT&amp;author=Stephens%2CR&amp;author=Neelam%2CB&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR33\">Graumann MB, DeRose SA, Ostrander EA, Storb R. Polymorphism analysis of four canine MHC class I genes. Tissue Antigens. 1998;51(4):374\u201381.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=9583809\" aria-label=\"PubMed reference 33\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 33\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Polymorphism%20analysis%20of%20four%20canine%20MHC%20class%20I%20genes&amp;journal=Tissue%20Antigens&amp;volume=51&amp;issue=4&amp;pages=374-81&amp;publication_year=1998&amp;author=Graumann%2CMB&amp;author=DeRose%2CSA&amp;author=Ostrander%2CEA&amp;author=Storb%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR34\">Holmes JC, Scholl EH, Dickey AN, Hess PR. High-resolution characterization of the structural features and genetic variation of six feline leukocyte antigen class I loci via single molecule, real-time (SMRT) sequencing. Immunogenetics. 2021;73(5):381\u201393.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=34175985\" aria-label=\"PubMed reference 34\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 34\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=High-resolution%20characterization%20of%20the%20structural%20features%20and%20genetic%20variation%20of%20six%20feline%20leukocyte%20antigen%20class%20I%20loci%20via%20single%20molecule%2C%20real-time%20%28SMRT%29%20sequencing&amp;journal=Immunogenetics&amp;volume=73&amp;issue=5&amp;pages=381-93&amp;publication_year=2021&amp;author=Holmes%2CJC&amp;author=Scholl%2CEH&amp;author=Dickey%2CAN&amp;author=Hess%2CPR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR35\">Zhu Y, Sun D, Ge Y, Yu B, Chen Y, Wan Q. Isolation and characterization of class I MHC genes in the giant panda (Ailuropoda melanoleuca). Chin Sci Bull. 2013;58(18):2140\u20137.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 35\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Isolation%20and%20characterization%20of%20class%20I%20MHC%20genes%20in%20the%20giant%20panda%20%28Ailuropoda%20melanoleuca%29&amp;journal=Chin%20Sci%20Bull&amp;volume=58&amp;issue=18&amp;pages=2140-7&amp;publication_year=2013&amp;author=Zhu%2CY&amp;author=Sun%2CD&amp;author=Ge%2CY&amp;author=Yu%2CB&amp;author=Chen%2CY&amp;author=Wan%2CQ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR36\">Marsden CD, Mable BK, Woodroffe R, Rasmussen GSA, Cleaveland S, McNutt JW, Emmanuel M, Thomas R, Kennedy LJ. Highly endangered African wild dogs (Lycaon pictus) lack variation at the major histocompatibility complex. J Hered. 2009;100(suppl1):S54\u201365.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 36\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Highly%20endangered%20African%20wild%20dogs%20%28Lycaon%20pictus%29%20lack%20variation%20at%20the%20major%20histocompatibility%20complex&amp;journal=J%20Hered&amp;volume=100&amp;issue=suppl1&amp;pages=S54-65&amp;publication_year=2009&amp;author=Marsden%2CCD&amp;author=Mable%2CBK&amp;author=Woodroffe%2CR&amp;author=Rasmussen%2CGSA&amp;author=Cleaveland%2CS&amp;author=McNutt%2CJW&amp;author=Emmanuel%2CM&amp;author=Thomas%2CR&amp;author=Kennedy%2CLJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR37\">Kennedy LJ, Randall DA, Knobel D, Brown JJ, Fooks AR, Argaw K, Shiferaw F, Ollier WER, Sillero-Zubiri C, Macdonald DW, et al. Major histocompatibility complex diversity in the endangered Ethiopian Wolf (Canis simensis). Tissue Antigens. 2011;77(2):118\u201325.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21214524\" aria-label=\"PubMed reference 37\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 37\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Major%20histocompatibility%20complex%20diversity%20in%20the%20endangered%20Ethiopian%20Wolf%20%28Canis%20simensis%29&amp;journal=Tissue%20Antigens&amp;volume=77&amp;issue=2&amp;pages=118-25&amp;publication_year=2011&amp;author=Kennedy%2CLJ&amp;author=Randall%2CDA&amp;author=Knobel%2CD&amp;author=Brown%2CJJ&amp;author=Fooks%2CAR&amp;author=Argaw%2CK&amp;author=Shiferaw%2CF&amp;author=Ollier%2CWER&amp;author=Sillero-Zubiri%2CC&amp;author=Macdonald%2CDW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR38\">Hedrick PW, Lee RN, Garrigan D. Major histocompatibility complex variation in red wolves: evidence for common ancestry with Coyotes and balancing selection. Mol Ecol. 2002;11(10):1905\u201313.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=12296935\" aria-label=\"PubMed reference 38\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 38\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Major%20histocompatibility%20complex%20variation%20in%20red%20wolves%3A%20evidence%20for%20common%20ancestry%20with%20Coyotes%20and%20balancing%20selection&amp;journal=Mol%20Ecol&amp;volume=11&amp;issue=10&amp;pages=1905-13&amp;publication_year=2002&amp;author=Hedrick%2CPW&amp;author=Lee%2CRN&amp;author=Garrigan%2CD\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR39\">Luo S-J, Kim J-H, Johnson WE, Walt Jvd, Martenson J, Yuhki N, Miquelle DG, Uphyrkina O, Goodrich JM, Quigley HB, et al. Phylogeography and genetic ancestry of Tigers (Panthera tigris). PLoS Biol. 2004;2(12):e442.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=15583716\" aria-label=\"PubMed reference 39\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC534810\" aria-label=\"PubMed Central reference 39\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 39\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Phylogeography%20and%20genetic%20ancestry%20of%20Tigers%20%28Panthera%20tigris%29&amp;journal=PLoS%20Biol&amp;volume=2&amp;issue=12&amp;publication_year=2004&amp;author=Luo%2CS-J&amp;author=Kim%2CJ-H&amp;author=Johnson%2CWE&amp;author=Walt%20Jvd%2C%20Martenson%2CJ&amp;author=Yuhki%2CN&amp;author=Miquelle%2CDG&amp;author=Uphyrkina%2CO&amp;author=Goodrich%2CJM&amp;author=Quigley%2CHB\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR40\">Pokorny I, Sharma R, Goyal SP, Mishra S, Tiedemann R. MHC class I and MHC class II DRB gene variability in wild and captive Bengal Tigers (Panthera Tigris Tigris). Immunogenetics. 2010;62:667\u201379.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=20821315\" aria-label=\"PubMed reference 40\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 40\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=MHC%20class%20I%20and%20MHC%20class%20II%20DRB%20gene%20variability%20in%20wild%20and%20captive%20Bengal%20Tigers%20%28Panthera%20Tigris%20Tigris%29&amp;journal=Immunogenetics&amp;volume=62&amp;pages=667-79&amp;publication_year=2010&amp;author=Pokorny%2CI&amp;author=Sharma%2CR&amp;author=Goyal%2CSP&amp;author=Mishra%2CS&amp;author=Tiedemann%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR41\">Castillo S, Srithayakumar V, Meunier V, Kyle CJ. Characterization of major histocompatibility complex (MHC) DRB exon 2 and DRA exon 3 fragments in a primary terrestrial rabies vector (Procyon lotor). PLoS ONE. 2010. <a href=\"https:\/\/doi.org\/10.1371\/journal.pone.0012066\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1371\/journal.pone.0012066\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1371\/journal.pone.0012066<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1371\/journal.pone.0012066\" data-track-item_id=\"10.1371\/journal.pone.0012066\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1371%2Fjournal.pone.0012066\" aria-label=\"Article reference 41\" data-doi=\"10.1371\/journal.pone.0012066\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21209925\" aria-label=\"PubMed reference 41\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3012133\" aria-label=\"PubMed Central reference 41\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 41\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Characterization%20of%20major%20histocompatibility%20complex%20%28MHC%29%20DRB%20exon%202%20and%20DRA%20exon%203%20fragments%20in%20a%20primary%20terrestrial%20rabies%20vector%20%28Procyon%20lotor%29&amp;journal=PLoS%20ONE&amp;doi=10.1371%2Fjournal.pone.0012066&amp;publication_year=2010&amp;author=Castillo%2CS&amp;author=Srithayakumar%2CV&amp;author=Meunier%2CV&amp;author=Kyle%2CCJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR42\">Hammond JA, Guethlein LA, Norman PJ, Parham P. Natural selection on marine carnivores elaborated a diverse family of classical MHC class I genes exhibiting haplotypic gene content variation and allelic polymorphism. Immunogenetics. 2012;64(12):915\u201333.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23001684\" aria-label=\"PubMed reference 42\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3518486\" aria-label=\"PubMed Central reference 42\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 42\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Natural%20selection%20on%20marine%20carnivores%20elaborated%20a%20diverse%20family%20of%20classical%20MHC%20class%20I%20genes%20exhibiting%20haplotypic%20gene%20content%20variation%20and%20allelic%20polymorphism&amp;journal=Immunogenetics&amp;volume=64&amp;issue=12&amp;pages=915-33&amp;publication_year=2012&amp;author=Hammond%2CJA&amp;author=Guethlein%2CLA&amp;author=Norman%2CPJ&amp;author=Parham%2CP\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR43\">Cant MA, Nichols HJ, Thompson FJ, Vitikainen E. Banded mongooses: Demography, life history, and social behavior. In: Cooperative breeding in vertebrates: Studies of ecology, evolution and behavior. Edited by Koenig WD, Dickinson JL. <a href=\"https:\/\/doi.org\/10.1017\/CBO9781107338357.019\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1017\/CBO9781107338357.019\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1017\/CBO9781107338357.019<\/a>. Cambridge UK: Cambridge University Press; 2016: 318\u2013337.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR44\">Hodge SJ, Bell MBV, Cant MA. Reproductive competition and the evolution of extreme birth synchrony in a cooperative mammal. Biol Lett. 2011. <a href=\"https:\/\/doi.org\/10.1098\/rsbl.2010.0555\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1098\/rsbl.2010.0555\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1098\/rsbl.2010.0555<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1098\/rsbl.2010.0555\" data-track-item_id=\"10.1098\/rsbl.2010.0555\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1098%2Frsbl.2010.0555\" aria-label=\"Article reference 44\" data-doi=\"10.1098\/rsbl.2010.0555\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=20685697\" aria-label=\"PubMed reference 44\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 44\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Reproductive%20competition%20and%20the%20evolution%20of%20extreme%20birth%20synchrony%20in%20a%20cooperative%20mammal&amp;journal=Biol%20Lett&amp;doi=10.1098%2Frsbl.2010.0555&amp;publication_year=2011&amp;author=Hodge%2CSJ&amp;author=Bell%2CMBV&amp;author=Cant%2CMA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR45\">Marshall HH, Johnstone RA, Thompson FJ, Nichols HJ, Wells D, Hoffman JI, Kalema-Zikusoka G, Sanderson JL, Vitikainen EIK, Blount JD, et al. A veil of ignorance can promote fairness in a mammal society. Nat Commun. 2021. <a href=\"https:\/\/doi.org\/10.1038\/s41467-021-23910-6\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1038\/s41467-021-23910-6\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1038\/s41467-021-23910-6<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1038\/s41467-021-23910-6\" data-track-item_id=\"10.1038\/s41467-021-23910-6\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1038%2Fs41467-021-23910-6\" aria-label=\"Article reference 45\" data-doi=\"10.1038\/s41467-021-23910-6\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=34916520\" aria-label=\"PubMed reference 45\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC8677732\" aria-label=\"PubMed Central reference 45\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 45\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=A%20veil%20of%20ignorance%20can%20promote%20fairness%20in%20a%20mammal%20society&amp;journal=Nat%20Commun&amp;doi=10.1038%2Fs41467-021-23910-6&amp;publication_year=2021&amp;author=Marshall%2CHH&amp;author=Johnstone%2CRA&amp;author=Thompson%2CFJ&amp;author=Nichols%2CHJ&amp;author=Wells%2CD&amp;author=Hoffman%2CJI&amp;author=Kalema-Zikusoka%2CG&amp;author=Sanderson%2CJL&amp;author=Vitikainen%2CEIK&amp;author=Blount%2CJD\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR46\">Wells DA, Cant MA, Hoffman JI, Nichols HJ. Inbreeding depresses altruism in a cooperative society. Ecol Lett. 2020;23(10):1460\u20137.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=32779837\" aria-label=\"PubMed reference 46\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 46\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Inbreeding%20depresses%20altruism%20in%20a%20cooperative%20society&amp;journal=Ecol%20Lett&amp;volume=23&amp;issue=10&amp;pages=1460-7&amp;publication_year=2020&amp;author=Wells%2CDA&amp;author=Cant%2CMA&amp;author=Hoffman%2CJI&amp;author=Nichols%2CHJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR47\">Wells DA, Cant MA, Nichols HJ, Hoffman JI. A high-quality pedigree and genetic markers both reveal inbreeding depression for quality but not survival in a cooperative mammal. Mol Ecol. 2018. <a href=\"https:\/\/doi.org\/10.1111\/mec.14570\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/mec.14570\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/mec.14570<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/mec.14570\" data-track-item_id=\"10.1111\/mec.14570\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fmec.14570\" aria-label=\"Article reference 47\" data-doi=\"10.1111\/mec.14570\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29802796\" aria-label=\"PubMed reference 47\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 47\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=A%20high-quality%20pedigree%20and%20genetic%20markers%20both%20reveal%20inbreeding%20depression%20for%20quality%20but%20not%20survival%20in%20a%20cooperative%20mammal&amp;journal=Mol%20Ecol&amp;doi=10.1111%2Fmec.14570&amp;publication_year=2018&amp;author=Wells%2CDA&amp;author=Cant%2CMA&amp;author=Nichols%2CHJ&amp;author=Hoffman%2CJI\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR48\">Khera M, Arbuckle K, Hoffman JI, Sanderson JL, Cant MA, Nichols HJ. Cooperatively breeding banded mongooses do not avoid inbreeding through familiarity-based kin recognition. Behav Ecol Sociobiol. 2021. <a href=\"https:\/\/doi.org\/10.1007\/s00265-021-03076-3\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/s00265-021-03076-3\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/s00265-021-03076-3<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1007\/s00265-021-03076-3\" data-track-item_id=\"10.1007\/s00265-021-03076-3\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1007\/s00265-021-03076-3\" aria-label=\"Article reference 48\" data-doi=\"10.1007\/s00265-021-03076-3\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 48\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Cooperatively%20breeding%20banded%20mongooses%20do%20not%20avoid%20inbreeding%20through%20familiarity-based%20kin%20recognition&amp;journal=Behav%20Ecol%20Sociobiol&amp;doi=10.1007%2Fs00265-021-03076-3&amp;publication_year=2021&amp;author=Khera%2CM&amp;author=Arbuckle%2CK&amp;author=Hoffman%2CJI&amp;author=Sanderson%2CJL&amp;author=Cant%2CMA&amp;author=Nichols%2CHJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR49\">Nichols HJ, Cant MA, Sanderson JL. Adjustment of costly extra-group paternity according to inbreeding risk in a cooperative mammal. Behav Ecol. 2015;26(6):1486\u201394.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=26609201\" aria-label=\"PubMed reference 49\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4652740\" aria-label=\"PubMed Central reference 49\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 49\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Adjustment%20of%20costly%20extra-group%20paternity%20according%20to%20inbreeding%20risk%20in%20a%20cooperative%20mammal&amp;journal=Behav%20Ecol&amp;volume=26&amp;issue=6&amp;pages=1486-94&amp;publication_year=2015&amp;author=Nichols%2CHJ&amp;author=Cant%2CMA&amp;author=Sanderson%2CJL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR50\">Sanderson JL, Wang J, Vitikainen EIK, Cant MA, Nichols HJ. Banded mongooses avoid inbreeding when mating with members of the same Natal group. Mol Ecol. 2015. <a href=\"https:\/\/doi.org\/10.1111\/mec.13253\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/mec.13253\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/mec.13253<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/mec.13253\" data-track-item_id=\"10.1111\/mec.13253\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fmec.13253\" aria-label=\"Article reference 50\" data-doi=\"10.1111\/mec.13253\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=26095171\" aria-label=\"PubMed reference 50\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5008155\" aria-label=\"PubMed Central reference 50\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 50\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Banded%20mongooses%20avoid%20inbreeding%20when%20mating%20with%20members%20of%20the%20same%20Natal%20group&amp;journal=Mol%20Ecol&amp;doi=10.1111%2Fmec.13253&amp;publication_year=2015&amp;author=Sanderson%2CJL&amp;author=Wang%2CJ&amp;author=Vitikainen%2CEIK&amp;author=Cant%2CMA&amp;author=Nichols%2CHJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR51\">Alexander KA, Laver PN, Williams MC, Sanderson CE, Kanipe C, Palmer MV. Pathology of the emerging Mycobacterium tuberculosis complex Pathogen, Mycobacterium mungi, in the banded mongoose (Mungos mungo). Vet Pathol. 2018. <a href=\"https:\/\/doi.org\/10.1177\/0300985817741730\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1177\/0300985817741730\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1177\/0300985817741730<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1177\/0300985817741730\" data-track-item_id=\"10.1177\/0300985817741730\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1177%2F0300985817741730\" aria-label=\"Article reference 51\" data-doi=\"10.1177\/0300985817741730\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29258402\" aria-label=\"PubMed reference 51\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 51\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Pathology%20of%20the%20emerging%20Mycobacterium%20tuberculosis%20complex%20Pathogen%2C%20Mycobacterium%20mungi%2C%20in%20the%20banded%20mongoose%20%28Mungos%20mungo%29&amp;journal=Vet%20Pathol&amp;doi=10.1177%2F0300985817741730&amp;publication_year=2018&amp;author=Alexander%2CKA&amp;author=Laver%2CPN&amp;author=Williams%2CMC&amp;author=Sanderson%2CCE&amp;author=Kanipe%2CC&amp;author=Palmer%2CMV\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR52\">Alexander KA, Sanderson CE, Larsen MH, Robbe-Austerman S, Williams MC, Palmer MV. Emerging tuberculosis pathogen hijacks social communication behavior in the group-living banded mongoose (Mungos mungo). mBio 2016, <a href=\"https:\/\/doi.org\/10.1128\/mBio.00281-16\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1128\/mBio.00281-16\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1128\/mBio.00281-16<\/a><\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR53\">Alexander KA, Sanderson CE, Laver PN. Novel Mycobacterium tuberculosis complex spp. In group-living African mammals. Tuberculosis, leprosy and mycobacterial diseases of man and animals: the many hosts of mycobacteria. Wallingford UK: CABI; 2015. pp. 386\u2013401. <a href=\"https:\/\/doi.org\/10.1079\/9781780643960.0386\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1079\/9781780643960.0386\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1079\/9781780643960.0386<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1079\/9781780643960.0386\" data-track-item_id=\"10.1079\/9781780643960.0386\" data-track-value=\"chapter reference\" data-track-action=\"chapter reference\" href=\"https:\/\/doi.org\/10.1079%2F9781780643960.0386\" aria-label=\"Chapter reference 53\" data-doi=\"10.1079\/9781780643960.0386\" target=\"_blank\">Chapter<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 53\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Novel%20Mycobacterium%20tuberculosis%20complex%20spp.%20In%20group-living%20African%20mammals&amp;doi=10.1079%2F9781780643960.0386&amp;pages=386-401&amp;publication_year=2015&amp;author=Alexander%2CKA&amp;author=Sanderson%2CCE&amp;author=Laver%2CPN\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR54\">Br\u00fcns AC, Tanner M, Williams MC, Botha L, O\u2019Brien A, Fosgate GT, van Helden PD, Clarke J, Michel AL. Diagnosis and implications of Mycobacterium Bovis infection in banded mongooses (Mungos mungo) in the Kruger National Park, South Africa. J Wildl Dis. 2017. <a href=\"https:\/\/doi.org\/10.7589\/2015-11-318\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.7589\/2015-11-318\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.7589\/2015-11-318<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.7589\/2015-11-318\" data-track-item_id=\"10.7589\/2015-11-318\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.7589%2F2015-11-318\" aria-label=\"Article reference 54\" data-doi=\"10.7589\/2015-11-318\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27788055\" aria-label=\"PubMed reference 54\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 54\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Diagnosis%20and%20implications%20of%20Mycobacterium%20Bovis%20infection%20in%20banded%20mongooses%20%28Mungos%20mungo%29%20in%20the%20Kruger%20National%20Park%2C%20South%20Africa&amp;journal=J%20Wildl%20Dis&amp;doi=10.7589%2F2015-11-318&amp;publication_year=2017&amp;author=Br%C3%BCns%2CAC&amp;author=Tanner%2CM&amp;author=Williams%2CMC&amp;author=Botha%2CL&amp;author=O%E2%80%99Brien%2CA&amp;author=Fosgate%2CGT&amp;author=Helden%2CPD&amp;author=Clarke%2CJ&amp;author=Michel%2CAL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR55\">Jordan NR, Mwanguhya F, Kyabulima S, R\u00fcedi P, Cant MA. Scent marking within and between groups of wild banded mongooses. J Zool. 2010. <a href=\"https:\/\/doi.org\/10.1111\/j.1469-7998.2009.00646.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/j.1469-7998.2009.00646.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/j.1469-7998.2009.00646.x<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/j.1469-7998.2009.00646.x\" data-track-item_id=\"10.1111\/j.1469-7998.2009.00646.x\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fj.1469-7998.2009.00646.x\" aria-label=\"Article reference 55\" data-doi=\"10.1111\/j.1469-7998.2009.00646.x\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 55\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Scent%20marking%20within%20and%20between%20groups%20of%20wild%20banded%20mongooses&amp;journal=J%20Zool&amp;doi=10.1111%2Fj.1469-7998.2009.00646.x&amp;publication_year=2010&amp;author=Jordan%2CNR&amp;author=Mwanguhya%2CF&amp;author=Kyabulima%2CS&amp;author=R%C3%BCedi%2CP&amp;author=Cant%2CMA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR56\">ASAB Ethical Committee, ABS Animal Care Committee. Guidelines for the treatment of animals in behavioural research and teaching. Anim Behav. 2022. <a href=\"https:\/\/doi.org\/10.1016\/s0003-3472(21)00389-4\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1016\/s0003-3472(21)00389-4\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1016\/s0003-3472(21)00389-4<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1016\/s0003-3472(21)00389-4\" data-track-item_id=\"10.1016\/s0003-3472(21)00389-4\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1016%2Fs0003-3472%2821%2900389-4\" aria-label=\"Article reference 56\" data-doi=\"10.1016\/s0003-3472(21)00389-4\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 56\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Guidelines%20for%20the%20treatment%20of%20animals%20in%20behavioural%20research%20and%20teaching&amp;journal=Anim%20Behav&amp;doi=10.1016%2Fs0003-3472%2821%2900389-4&amp;publication_year=2022\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR57\">Yuhki N, O\u2019Brien SJ. DNA variation of the mammalian major histocompatibility complex reflects genomic diversity and population history. Proc Natl Acad Sci USA. 1990. <a href=\"https:\/\/doi.org\/10.1073\/pnas.87.2.836\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1073\/pnas.87.2.836\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1073\/pnas.87.2.836<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1073\/pnas.87.2.836\" data-track-item_id=\"10.1073\/pnas.87.2.836\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1073%2Fpnas.87.2.836\" aria-label=\"Article reference 57\" data-doi=\"10.1073\/pnas.87.2.836\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=1967831\" aria-label=\"PubMed reference 57\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC53361\" aria-label=\"PubMed Central reference 57\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 57\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=DNA%20variation%20of%20the%20mammalian%20major%20histocompatibility%20complex%20reflects%20genomic%20diversity%20and%20population%20history&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;doi=10.1073%2Fpnas.87.2.836&amp;publication_year=1990&amp;author=Yuhki%2CN&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR58\">Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 2013. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/mst010\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/mst010\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/mst010<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/mst010\" data-track-item_id=\"10.1093\/molbev\/mst010\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmst010\" aria-label=\"Article reference 58\" data-doi=\"10.1093\/molbev\/mst010\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23329690\" aria-label=\"PubMed reference 58\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3603318\" aria-label=\"PubMed Central reference 58\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 58\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=MAFFT%20multiple%20sequence%20alignment%20software%20version%207%3A%20improvements%20in%20performance%20and%20usability&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmst010&amp;publication_year=2013&amp;author=Katoh%2CK&amp;author=Standley%2CDM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR59\">Untergasser A, Cutcutache I, Koressaar T, Ye J, Faircloth BC, Remm M, Rozen SG. Primer3-new capabilities and interfaces. Nucleic Acids Res. 2012. <a href=\"https:\/\/doi.org\/10.1093\/nar\/gks596\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/nar\/gks596\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/nar\/gks596<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/nar\/gks596\" data-track-item_id=\"10.1093\/nar\/gks596\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fnar%2Fgks596\" aria-label=\"Article reference 59\" data-doi=\"10.1093\/nar\/gks596\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22730293\" aria-label=\"PubMed reference 59\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3424584\" aria-label=\"PubMed Central reference 59\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 59\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Primer3-new%20capabilities%20and%20interfaces&amp;journal=Nucleic%20Acids%20Res&amp;doi=10.1093%2Fnar%2Fgks596&amp;publication_year=2012&amp;author=Untergasser%2CA&amp;author=Cutcutache%2CI&amp;author=Koressaar%2CT&amp;author=Ye%2CJ&amp;author=Faircloth%2CBC&amp;author=Remm%2CM&amp;author=Rozen%2CSG\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR60\">Faircloth BC, Glenn TC. Not all sequence tags are created equal: designing and validating sequence identification tags robust to indels. PLoS ONE. 2012. <a href=\"https:\/\/doi.org\/10.1371\/journal.pone.0042543\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1371\/journal.pone.0042543\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1371\/journal.pone.0042543<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1371\/journal.pone.0042543\" data-track-item_id=\"10.1371\/journal.pone.0042543\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1371%2Fjournal.pone.0042543\" aria-label=\"Article reference 60\" data-doi=\"10.1371\/journal.pone.0042543\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22900027\" aria-label=\"PubMed reference 60\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3416851\" aria-label=\"PubMed Central reference 60\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 60\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Not%20all%20sequence%20tags%20are%20created%20equal%3A%20designing%20and%20validating%20sequence%20identification%20tags%20robust%20to%20indels&amp;journal=PLoS%20ONE&amp;doi=10.1371%2Fjournal.pone.0042543&amp;publication_year=2012&amp;author=Faircloth%2CBC&amp;author=Glenn%2CTC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR61\">Sebastian A, Herdegen M, Migalska M, Radwan J. Amplisas: A web server for multilocus genotyping using next-generation amplicon sequencing data. Mol Ecol Resour. 2016. <a href=\"https:\/\/doi.org\/10.1111\/1755-0998.12453\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/1755-0998.12453\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/1755-0998.12453<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/1755-0998.12453\" data-track-item_id=\"10.1111\/1755-0998.12453\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2F1755-0998.12453\" aria-label=\"Article reference 61\" data-doi=\"10.1111\/1755-0998.12453\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27762049\" aria-label=\"PubMed reference 61\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 61\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Amplisas%3A%20A%20web%20server%20for%20multilocus%20genotyping%20using%20next-generation%20amplicon%20sequencing%20data&amp;journal=Mol%20Ecol%20Resour&amp;doi=10.1111%2F1755-0998.12453&amp;publication_year=2016&amp;author=Sebastian%2CA&amp;author=Herdegen%2CM&amp;author=Migalska%2CM&amp;author=Radwan%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR62\">Zhang Z, Schwartz S, Wagner L, Miller W. A greedy algorithm for aligning DNA sequences. J Comput Biol. 2000;7(1\u20132):203\u201314.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10890397\" aria-label=\"PubMed reference 62\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 62\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=A%20greedy%20algorithm%20for%20aligning%20DNA%20sequences&amp;journal=J%20Comput%20Biol&amp;volume=7&amp;issue=1%E2%80%932&amp;pages=203-14&amp;publication_year=2000&amp;author=Zhang%2CZ&amp;author=Schwartz%2CS&amp;author=Wagner%2CL&amp;author=Miller%2CW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR63\">Kaufman J, Salomonsen J, Flajnik M. Evolutionary conservation of MHC class I and class II molecules &#8211; different yet the same. Semin Immunol. 1994;6(6):411\u201324.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=7654997\" aria-label=\"PubMed reference 63\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 63\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Evolutionary%20conservation%20of%20MHC%20class%20I%20and%20class%20II%20molecules%20-%20different%20yet%20the%20same&amp;journal=Semin%20Immunol&amp;volume=6&amp;issue=6&amp;pages=411-24&amp;publication_year=1994&amp;author=Kaufman%2CJ&amp;author=Salomonsen%2CJ&amp;author=Flajnik%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR64\">Reche PA, Reinherz EL. Sequence variability analysis of human class I and class II MHC molecules: functional and structural correlates of amino acid polymorphisms. J Mol Biol. 2003. <a href=\"https:\/\/doi.org\/10.1016\/S0022-2836(03)00750-2\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1016\/S0022-2836(03)00750-2\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1016\/S0022-2836(03)00750-2<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1016\/S0022-2836(03)00750-2\" data-track-item_id=\"10.1016\/S0022-2836(03)00750-2\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1016%2FS0022-2836%2803%2900750-2\" aria-label=\"Article reference 64\" data-doi=\"10.1016\/S0022-2836(03)00750-2\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=12899833\" aria-label=\"PubMed reference 64\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 64\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Sequence%20variability%20analysis%20of%20human%20class%20I%20and%20class%20II%20MHC%20molecules%3A%20functional%20and%20structural%20correlates%20of%20amino%20acid%20polymorphisms&amp;journal=J%20Mol%20Biol&amp;doi=10.1016%2FS0022-2836%2803%2900750-2&amp;publication_year=2003&amp;author=Reche%2CPA&amp;author=Reinherz%2CEL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR65\">Huang K, Zhang P, Dunn DW, Wang T, Mi R, Li B. Assigning alleles to different loci in amplifications of duplicated loci. Mol Ecol Resour. 2019;19:1240\u201353.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=31094065\" aria-label=\"PubMed reference 65\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 65\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Assigning%20alleles%20to%20different%20loci%20in%20amplifications%20of%20duplicated%20loci&amp;journal=Mol%20Ecol%20Resour&amp;volume=19&amp;pages=1240-53&amp;publication_year=2019&amp;author=Huang%2CK&amp;author=Zhang%2CP&amp;author=Dunn%2CDW&amp;author=Wang%2CT&amp;author=Mi%2CR&amp;author=Li%2CB\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR66\">IUCN: The IUCN Red List of Threatened Species. Version 2024-1. 2024, <a href=\"https:\/\/www.iucnredlist.org\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"https:\/\/www.iucnredlist.org\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/www.iucnredlist.org<\/a><\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR67\">Rozas J, Ferrer-Mata A, Sanchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE, Sanchez-Gracia A. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol. 2017. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msx248\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/msx248\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/msx248<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/msx248\" data-track-item_id=\"10.1093\/molbev\/msx248\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmsx248\" aria-label=\"Article reference 67\" data-doi=\"10.1093\/molbev\/msx248\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29029172\" aria-label=\"PubMed reference 67\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 67\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=DnaSP%206%3A%20DNA%20sequence%20polymorphism%20analysis%20of%20large%20data%20sets&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmsx248&amp;publication_year=2017&amp;author=Rozas%2CJ&amp;author=Ferrer-Mata%2CA&amp;author=Sanchez-DelBarrio%2CJC&amp;author=Guirao-Rico%2CS&amp;author=Librado%2CP&amp;author=Ramos-Onsins%2CSE&amp;author=Sanchez-Gracia%2CA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR68\">Kumar S, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msy096\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/msy096\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/msy096<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/msy096\" data-track-item_id=\"10.1093\/molbev\/msy096\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmsy096\" aria-label=\"Article reference 68\" data-doi=\"10.1093\/molbev\/msy096\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29893954\" aria-label=\"PubMed reference 68\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6063297\" aria-label=\"PubMed Central reference 68\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 68\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=MEGA%20X%3A%20molecular%20evolutionary%20genetics%20analysis%20across%20computing%20platforms&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmsy096&amp;publication_year=2018&amp;author=Kumar%2CS&amp;author=Stecher%2CG&amp;author=Li%2CM&amp;author=Knyaz%2CC&amp;author=Tamura%2CK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR69\">Winternitz J, Chakarov N, Rinaud T, Ottensmann M, Kr\u00fcger O. High functional allelic diversity and copy number in both MHC classes in the common buzzard. BMC Ecol Evol. 2023. <a href=\"https:\/\/doi.org\/10.1186\/s12862-023-02135-9\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1186\/s12862-023-02135-9\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1186\/s12862-023-02135-9<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1186\/s12862-023-02135-9\" data-track-item_id=\"10.1186\/s12862-023-02135-9\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1186\/s12862-023-02135-9\" aria-label=\"Article reference 69\" data-doi=\"10.1186\/s12862-023-02135-9\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=37355591\" aria-label=\"PubMed reference 69\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC10290333\" aria-label=\"PubMed Central reference 69\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 69\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=High%20functional%20allelic%20diversity%20and%20copy%20number%20in%20both%20MHC%20classes%20in%20the%20common%20buzzard&amp;journal=BMC%20Ecol%20Evol&amp;doi=10.1186%2Fs12862-023-02135-9&amp;publication_year=2023&amp;author=Winternitz%2CJ&amp;author=Chakarov%2CN&amp;author=Rinaud%2CT&amp;author=Ottensmann%2CM&amp;author=Kr%C3%BCger%2CO\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR70\">Martin DP, Murrell B, Golden M, Khoosal A, Muhire B. RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol. 2015. <a href=\"https:\/\/doi.org\/10.1093\/ve\/vev003\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/ve\/vev003\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/ve\/vev003<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/ve\/vev003\" data-track-item_id=\"10.1093\/ve\/vev003\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fve%2Fvev003\" aria-label=\"Article reference 70\" data-doi=\"10.1093\/ve\/vev003\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27774281\" aria-label=\"PubMed reference 70\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5014477\" aria-label=\"PubMed Central reference 70\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 70\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=RDP4%3A%20detection%20and%20analysis%20of%20recombination%20patterns%20in%20virus%20genomes&amp;journal=Virus%20Evol&amp;doi=10.1093%2Fve%2Fvev003&amp;publication_year=2015&amp;author=Martin%2CDP&amp;author=Murrell%2CB&amp;author=Golden%2CM&amp;author=Khoosal%2CA&amp;author=Muhire%2CB\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR71\">Martin D, Rybicki E. RDP: detection of recombination amongst aligned sequences. Bioinformatics. 2000. <a href=\"https:\/\/doi.org\/10.1093\/bioinformatics\/16.6.562\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/bioinformatics\/16.6.562\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/bioinformatics\/16.6.562<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/bioinformatics\/16.6.562\" data-track-item_id=\"10.1093\/bioinformatics\/16.6.562\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fbioinformatics%2F16.6.562\" aria-label=\"Article reference 71\" data-doi=\"10.1093\/bioinformatics\/16.6.562\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10980155\" aria-label=\"PubMed reference 71\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 71\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=RDP%3A%20detection%20of%20recombination%20amongst%20aligned%20sequences&amp;journal=Bioinformatics&amp;doi=10.1093%2Fbioinformatics%2F16.6.562&amp;publication_year=2000&amp;author=Martin%2CD&amp;author=Rybicki%2CE\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR72\">Padidam M, Sawyer S, Fauquet CM. Possible emergence of new geminiviruses by frequent recombination. Virology. 1999;265(2):218\u201325.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10600594\" aria-label=\"PubMed reference 72\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 72\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Possible%20emergence%20of%20new%20geminiviruses%20by%20frequent%20recombination&amp;journal=Virology&amp;volume=265&amp;issue=2&amp;pages=218-25&amp;publication_year=1999&amp;author=Padidam%2CM&amp;author=Sawyer%2CS&amp;author=Fauquet%2CCM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR73\">Salminen MO, Carr JK, Burke DS, McCutchan FE. Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res Hum Retroviruses. 1995. <a href=\"https:\/\/doi.org\/10.1089\/aid.1995.11.1423\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1089\/aid.1995.11.1423\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1089\/aid.1995.11.1423<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1089\/aid.1995.11.1423\" data-track-item_id=\"10.1089\/aid.1995.11.1423\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1089%2Faid.1995.11.1423\" aria-label=\"Article reference 73\" data-doi=\"10.1089\/aid.1995.11.1423\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=8573403\" aria-label=\"PubMed reference 73\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 73\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Identification%20of%20breakpoints%20in%20intergenotypic%20recombinants%20of%20HIV%20type%201%20by%20bootscanning&amp;journal=AIDS%20Res%20Hum%20Retroviruses&amp;doi=10.1089%2Faid.1995.11.1423&amp;publication_year=1995&amp;author=Salminen%2CMO&amp;author=Carr%2CJK&amp;author=Burke%2CDS&amp;author=McCutchan%2CFE\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR74\">Gibbs MJ, Armstrong JS, Gibbs AJ. Sister-scanning: A Monte Carlo procedure for assessing signals in rebombinant sequences. Bioinformatics. 2000. <a href=\"https:\/\/doi.org\/10.1093\/bioinformatics\/16.7.573\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/bioinformatics\/16.7.573\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/bioinformatics\/16.7.573<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/bioinformatics\/16.7.573\" data-track-item_id=\"10.1093\/bioinformatics\/16.7.573\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fbioinformatics%2F16.7.573\" aria-label=\"Article reference 74\" data-doi=\"10.1093\/bioinformatics\/16.7.573\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=11038328\" aria-label=\"PubMed reference 74\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 74\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Sister-scanning%3A%20A%20Monte%20Carlo%20procedure%20for%20assessing%20signals%20in%20rebombinant%20sequences&amp;journal=Bioinformatics&amp;doi=10.1093%2Fbioinformatics%2F16.7.573&amp;publication_year=2000&amp;author=Gibbs%2CMJ&amp;author=Armstrong%2CJS&amp;author=Gibbs%2CAJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR75\">Smith JM. Analyzing the mosaic structure of genes. J Mol Evol. 1992. <a href=\"https:\/\/doi.org\/10.1007\/BF00182389\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/BF00182389\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/BF00182389<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1007\/BF00182389\" data-track-item_id=\"10.1007\/BF00182389\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1007\/BF00182389\" aria-label=\"Article reference 75\" data-doi=\"10.1007\/BF00182389\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=1593646\" aria-label=\"PubMed reference 75\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 75\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Analyzing%20the%20mosaic%20structure%20of%20genes&amp;journal=J%20Mol%20Evol&amp;doi=10.1007%2FBF00182389&amp;publication_year=1992&amp;author=Smith%2CJM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR76\">Posada D, Crandall KA. Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci USA. 2001. <a href=\"https:\/\/doi.org\/10.1073\/pnas.241370698\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1073\/pnas.241370698\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1073\/pnas.241370698<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1073\/pnas.241370698\" data-track-item_id=\"10.1073\/pnas.241370698\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1073%2Fpnas.241370698\" aria-label=\"Article reference 76\" data-doi=\"10.1073\/pnas.241370698\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=11717435\" aria-label=\"PubMed reference 76\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC61114\" aria-label=\"PubMed Central reference 76\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 76\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Evaluation%20of%20methods%20for%20detecting%20recombination%20from%20DNA%20sequences%3A%20computer%20simulations&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;doi=10.1073%2Fpnas.241370698&amp;publication_year=2001&amp;author=Posada%2CD&amp;author=Crandall%2CKA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR77\">Boni MF, Posada D, Feldman MW. An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics. 2007. <a href=\"https:\/\/doi.org\/10.1534\/genetics.106.068874\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1534\/genetics.106.068874\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1534\/genetics.106.068874<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1534\/genetics.106.068874\" data-track-item_id=\"10.1534\/genetics.106.068874\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1534%2Fgenetics.106.068874\" aria-label=\"Article reference 77\" data-doi=\"10.1534\/genetics.106.068874\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=17409078\" aria-label=\"PubMed reference 77\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC1894573\" aria-label=\"PubMed Central reference 77\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 77\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=An%20exact%20nonparametric%20method%20for%20inferring%20mosaic%20structure%20in%20sequence%20triplets&amp;journal=Genetics&amp;doi=10.1534%2Fgenetics.106.068874&amp;publication_year=2007&amp;author=Boni%2CMF&amp;author=Posada%2CD&amp;author=Feldman%2CMW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR78\">Martin DP, Murrell B, Khoosal A, Muhire B. Detecting and analyzing genetic recombination using RDP4. In: Bioinformatics Methods in Molecular Biology. Edited by Kieth J, vol. 1525. New York, NY: Humana Press; 2017.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR79\">Murrell B, Moola S, Mabona A, Weighill T, Sheward D, Kosakovsky Pond SL, Scheffler K. FUBAR: A fast, unconstrained bayesian approximation for inferring selection. Mol Biol Evol. 2013. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/mst030\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/mst030\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/mst030<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/mst030\" data-track-item_id=\"10.1093\/molbev\/mst030\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmst030\" aria-label=\"Article reference 79\" data-doi=\"10.1093\/molbev\/mst030\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23420840\" aria-label=\"PubMed reference 79\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3670733\" aria-label=\"PubMed Central reference 79\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 79\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=FUBAR%3A%20A%20fast%2C%20unconstrained%20bayesian%20approximation%20for%20inferring%20selection&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmst030&amp;publication_year=2013&amp;author=Murrell%2CB&amp;author=Moola%2CS&amp;author=Mabona%2CA&amp;author=Weighill%2CT&amp;author=Sheward%2CD&amp;author=Kosakovsky%20Pond%2CSL&amp;author=Scheffler%2CK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR80\">Murrell B, Wertheim JO, Moola S, Weighill T, Scheffler K, Kosakovsky Pond SL. Detecting individual sites subject to episodic diversifying selection. PLoS Genet. 2012. <a href=\"https:\/\/doi.org\/10.1371\/journal.pgen.1002764\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1371\/journal.pgen.1002764\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1371\/journal.pgen.1002764<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1371\/journal.pgen.1002764\" data-track-item_id=\"10.1371\/journal.pgen.1002764\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1371%2Fjournal.pgen.1002764\" aria-label=\"Article reference 80\" data-doi=\"10.1371\/journal.pgen.1002764\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22807683\" aria-label=\"PubMed reference 80\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3395634\" aria-label=\"PubMed Central reference 80\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 80\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Detecting%20individual%20sites%20subject%20to%20episodic%20diversifying%20selection&amp;journal=PLoS%20Genet&amp;doi=10.1371%2Fjournal.pgen.1002764&amp;publication_year=2012&amp;author=Murrell%2CB&amp;author=Wertheim%2CJO&amp;author=Moola%2CS&amp;author=Weighill%2CT&amp;author=Scheffler%2CK&amp;author=Kosakovsky%20Pond%2CSL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR81\">Weaver S, Shank SD, Spielman SJ, Li M, Muse SV, Kosakovsky Pond SL. Datamonkey 2.0: A modern web application for characterizing selective and other evolutionary processes. Mol Biol Evol. 2018. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msx335\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/msx335\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/msx335<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/msx335\" data-track-item_id=\"10.1093\/molbev\/msx335\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmsx335\" aria-label=\"Article reference 81\" data-doi=\"10.1093\/molbev\/msx335\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29401317\" aria-label=\"PubMed reference 81\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5995201\" aria-label=\"PubMed Central reference 81\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 81\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Datamonkey%202.0%3A%20A%20modern%20web%20application%20for%20characterizing%20selective%20and%20other%20evolutionary%20processes&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmsx335&amp;publication_year=2018&amp;author=Weaver%2CS&amp;author=Shank%2CSD&amp;author=Spielman%2CSJ&amp;author=Li%2CM&amp;author=Muse%2CSV&amp;author=Kosakovsky%20Pond%2CSL\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR82\">Gao F, Chen C, Arab DA, Du Z, He Y, Ho SYW. EasyCodeML: A visual tool for analysis of selection using codeml. Ecol Evol. 2019;9(7):3891\u20138.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=31015974\" aria-label=\"PubMed reference 82\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6467853\" aria-label=\"PubMed Central reference 82\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 82\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=EasyCodeML%3A%20A%20visual%20tool%20for%20analysis%20of%20selection%20using%20codeml&amp;journal=Ecol%20Evol&amp;volume=9&amp;issue=7&amp;pages=3891-8&amp;publication_year=2019&amp;author=Gao%2CF&amp;author=Chen%2CC&amp;author=Arab%2CDA&amp;author=Du%2CZ&amp;author=He%2CY&amp;author=Ho%2CSYW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR83\">Yang Z. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 2007;24(8):1586\u201391.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=17483113\" aria-label=\"PubMed reference 83\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 83\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=PAML%204%3A%20phylogenetic%20analysis%20by%20maximum%20likelihood&amp;journal=Mol%20Biol%20Evol&amp;volume=24&amp;issue=8&amp;pages=1586-91&amp;publication_year=2007&amp;author=Yang%2CZ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR84\">Katoh K, Misawa K, Kuma KI, Miyata T. MAFFT: A novel method for rapid multiple sequence alignment based on fast fourier transform. Nucleic Acids Res. 2002. <a href=\"https:\/\/doi.org\/10.1093\/nar\/gkf436\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/nar\/gkf436\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/nar\/gkf436<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/nar\/gkf436\" data-track-item_id=\"10.1093\/nar\/gkf436\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fnar%2Fgkf436\" aria-label=\"Article reference 84\" data-doi=\"10.1093\/nar\/gkf436\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=12136088\" aria-label=\"PubMed reference 84\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC135756\" aria-label=\"PubMed Central reference 84\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 84\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=MAFFT%3A%20A%20novel%20method%20for%20rapid%20multiple%20sequence%20alignment%20based%20on%20fast%20fourier%20transform&amp;journal=Nucleic%20Acids%20Res&amp;doi=10.1093%2Fnar%2Fgkf436&amp;publication_year=2002&amp;author=Katoh%2CK&amp;author=Misawa%2CK&amp;author=Kuma%2CKI&amp;author=Miyata%2CT\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR85\">Trifinopoulos J, Nguyen LT, von Haeseler A, Minh BQ. W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis. Nucleic Acids Res. 2016. <a href=\"https:\/\/doi.org\/10.1093\/NAR\/GKW256\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/NAR\/GKW256\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/NAR\/GKW256<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/NAR\/GKW256\" data-track-item_id=\"10.1093\/NAR\/GKW256\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2FNAR%2FGKW256\" aria-label=\"Article reference 85\" data-doi=\"10.1093\/NAR\/GKW256\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27084950\" aria-label=\"PubMed reference 85\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4987875\" aria-label=\"PubMed Central reference 85\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 85\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=W-IQ-TREE%3A%20a%20fast%20online%20phylogenetic%20tool%20for%20maximum%20likelihood%20analysis&amp;journal=Nucleic%20Acids%20Res&amp;doi=10.1093%2FNAR%2FGKW256&amp;publication_year=2016&amp;author=Trifinopoulos%2CJ&amp;author=Nguyen%2CLT&amp;author=Haeseler%2CA&amp;author=Minh%2CBQ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR86\">Kalyaanamoorthy S, Minh BQ, Wong TKF, Von Haeseler A, Jermiin LS. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 2017. <a href=\"https:\/\/doi.org\/10.1038\/nmeth.4285\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1038\/nmeth.4285\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1038\/nmeth.4285<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1038\/nmeth.4285\" data-track-item_id=\"10.1038\/nmeth.4285\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1038%2Fnmeth.4285\" aria-label=\"Article reference 86\" data-doi=\"10.1038\/nmeth.4285\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=28481363\" aria-label=\"PubMed reference 86\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5453245\" aria-label=\"PubMed Central reference 86\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 86\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=ModelFinder%3A%20fast%20model%20selection%20for%20accurate%20phylogenetic%20estimates&amp;journal=Nat%20Methods&amp;doi=10.1038%2Fnmeth.4285&amp;publication_year=2017&amp;author=Kalyaanamoorthy%2CS&amp;author=Minh%2CBQ&amp;author=Wong%2CTKF&amp;author=Haeseler%2CA&amp;author=Jermiin%2CLS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR87\">Nguyen LT, Schmidt HA, Von Haeseler A, Minh BQ. IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 2015;32(1):268\u201374.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=25371430\" aria-label=\"PubMed reference 87\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 87\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=IQ-TREE%3A%20A%20fast%20and%20effective%20stochastic%20algorithm%20for%20estimating%20maximum-likelihood%20phylogenies&amp;journal=Mol%20Biol%20Evol&amp;volume=32&amp;issue=1&amp;pages=268-74&amp;publication_year=2015&amp;author=Nguyen%2CLT&amp;author=Schmidt%2CHA&amp;author=Haeseler%2CA&amp;author=Minh%2CBQ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR88\">Hoang DT, Chernomor O, Von Haeseler A, Minh BQ, Vinh LS. UFBoot2: improving the ultrafast bootstrap approximation. Mol Biol Evol. 2018. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msx281\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/molbev\/msx281\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/molbev\/msx281<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/molbev\/msx281\" data-track-item_id=\"10.1093\/molbev\/msx281\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fmolbev%2Fmsx281\" aria-label=\"Article reference 88\" data-doi=\"10.1093\/molbev\/msx281\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29077904\" aria-label=\"PubMed reference 88\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 88\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=UFBoot2%3A%20improving%20the%20ultrafast%20bootstrap%20approximation&amp;journal=Mol%20Biol%20Evol&amp;doi=10.1093%2Fmolbev%2Fmsx281&amp;publication_year=2018&amp;author=Hoang%2CDT&amp;author=Chernomor%2CO&amp;author=Haeseler%2CA&amp;author=Minh%2CBQ&amp;author=Vinh%2CLS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR89\">Nei M, Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol. 1986;3(5):418\u201326.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=3444411\" aria-label=\"PubMed reference 89\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 89\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Simple%20methods%20for%20estimating%20the%20numbers%20of%20synonymous%20and%20nonsynonymous%20nucleotide%20substitutions&amp;journal=Mol%20Biol%20Evol&amp;volume=3&amp;issue=5&amp;pages=418-26&amp;publication_year=1986&amp;author=Nei%2CM&amp;author=Gojobori%2CT\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR90\">Sandberg M, Eriksson L, Jonsson J, Sj\u00f6str\u00f6m M, Wold S. New chemical descriptors relevant for the design of biologically active peptides. A multivariate characterization of 87 amino acids. J Med Chem. 1998. <a href=\"https:\/\/doi.org\/10.1021\/jm9700575\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1021\/jm9700575\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1021\/jm9700575<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1021\/jm9700575\" data-track-item_id=\"10.1021\/jm9700575\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1021%2Fjm9700575\" aria-label=\"Article reference 90\" data-doi=\"10.1021\/jm9700575\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=9651153\" aria-label=\"PubMed reference 90\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 90\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=New%20chemical%20descriptors%20relevant%20for%20the%20design%20of%20biologically%20active%20peptides.%20A%20multivariate%20characterization%20of%2087%20amino%20acids&amp;journal=J%20Med%20Chem&amp;doi=10.1021%2Fjm9700575&amp;publication_year=1998&amp;author=Sandberg%2CM&amp;author=Eriksson%2CL&amp;author=Jonsson%2CJ&amp;author=Sj%C3%B6str%C3%B6m%2CM&amp;author=Wold%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR91\">Osorio D, Rond\u00f3n-Villarreal P, Torres R. Peptides: A package for data mining of antimicrobial peptides. R J. 2015. <a href=\"https:\/\/doi.org\/10.32614\/rj-2015-001\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.32614\/rj-2015-001\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.32614\/rj-2015-001<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.32614\/rj-2015-001\" data-track-item_id=\"10.32614\/rj-2015-001\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.32614%2Frj-2015-001\" aria-label=\"Article reference 91\" data-doi=\"10.32614\/rj-2015-001\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 91\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Peptides%3A%20A%20package%20for%20data%20mining%20of%20antimicrobial%20peptides&amp;journal=R%20J&amp;doi=10.32614%2Frj-2015-001&amp;publication_year=2015&amp;author=Osorio%2CD&amp;author=Rond%C3%B3n-Villarreal%2CP&amp;author=Torres%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR92\">Jombart T. Adegenet: A R package for the multivariate analysis of genetic markers. Bioinformatics. 2008. <a href=\"https:\/\/doi.org\/10.1093\/bioinformatics\/btn129\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/bioinformatics\/btn129\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/bioinformatics\/btn129<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1093\/bioinformatics\/btn129\" data-track-item_id=\"10.1093\/bioinformatics\/btn129\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1093%2Fbioinformatics%2Fbtn129\" aria-label=\"Article reference 92\" data-doi=\"10.1093\/bioinformatics\/btn129\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=18397895\" aria-label=\"PubMed reference 92\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 92\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Adegenet%3A%20A%20R%20package%20for%20the%20multivariate%20analysis%20of%20genetic%20markers&amp;journal=Bioinformatics&amp;doi=10.1093%2Fbioinformatics%2Fbtn129&amp;publication_year=2008&amp;author=Jombart%2CT\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR93\">Gamer M, Lemon J, Fellows I, Singh P. Irr: various coefficients of interrater reliability and agreement. R package version 0.84.1. In.; 2019.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR94\">Wei T, Simko V. R package \u2018corrplot\u2019: Visualization of a Correlation Matrix. In, <a href=\"https:\/\/github.com\/taiyun\/corrplot\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"https:\/\/github.com\/taiyun\/corrplot\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/github.com\/taiyun\/corrplot<\/a>, Version 0.95 edn; 2024.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR95\">Yuhki N, Mullikin JC, Beck T, Stephens R, O\u2019Brien SJ. Sequences, annotation and single nucleotide polymorphism of the major histocompatibility complex in the domestic Cat. PLoS ONE. 2008. <a href=\"https:\/\/doi.org\/10.1371\/journal.pone.0002674\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1371\/journal.pone.0002674\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1371\/journal.pone.0002674<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1371\/journal.pone.0002674\" data-track-item_id=\"10.1371\/journal.pone.0002674\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1371%2Fjournal.pone.0002674\" aria-label=\"Article reference 95\" data-doi=\"10.1371\/journal.pone.0002674\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=18629345\" aria-label=\"PubMed reference 95\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC2453318\" aria-label=\"PubMed Central reference 95\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 95\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Sequences%2C%20annotation%20and%20single%20nucleotide%20polymorphism%20of%20the%20major%20histocompatibility%20complex%20in%20the%20domestic%20Cat&amp;journal=PLoS%20ONE&amp;doi=10.1371%2Fjournal.pone.0002674&amp;publication_year=2008&amp;author=Yuhki%2CN&amp;author=Mullikin%2CJC&amp;author=Beck%2CT&amp;author=Stephens%2CR&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR96\">Okano M, Miyamae J, Suzuki S, Nishiya K, Katakura F, Kulski JK, Moritomo T, Shiina T. Identification of novel alleles and structural haplotypes of major histocompatibility complex class I and DRB genes in domestic Cat (Felis Catus) by a newly developed NGS-based genotyping method. Front Genet. 2020;11:750.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=32760428\" aria-label=\"PubMed reference 96\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7375346\" aria-label=\"PubMed Central reference 96\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 96\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Identification%20of%20novel%20alleles%20and%20structural%20haplotypes%20of%20major%20histocompatibility%20complex%20class%20I%20and%20DRB%20genes%20in%20domestic%20Cat%20%28Felis%20Catus%29%20by%20a%20newly%20developed%20NGS-based%20genotyping%20method&amp;journal=Front%20Genet&amp;volume=11&amp;publication_year=2020&amp;author=Okano%2CM&amp;author=Miyamae%2CJ&amp;author=Suzuki%2CS&amp;author=Nishiya%2CK&amp;author=Katakura%2CF&amp;author=Kulski%2CJK&amp;author=Moritomo%2CT&amp;author=Shiina%2CT\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR97\">Drake GJC, Kennedy LJ, Auty HK, Ryvar R, Ollier WER, Kitchener AC, Freeman AR, Radford AD. The use of reference strand-mediated conformational analysis for the study of cheetah (Acinonyx jubatus) feline leucocyte antigen class II DRB polymorphisms. Mol Ecol. 2004. <a href=\"https:\/\/doi.org\/10.1046\/j.1365-294X.2003.02027.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1046\/j.1365-294X.2003.02027.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1046\/j.1365-294X.2003.02027.x<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1046\/j.1365-294X.2003.02027.x\" data-track-item_id=\"10.1046\/j.1365-294X.2003.02027.x\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1046%2Fj.1365-294X.2003.02027.x\" aria-label=\"Article reference 97\" data-doi=\"10.1046\/j.1365-294X.2003.02027.x\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=14653802\" aria-label=\"PubMed reference 97\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 97\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=The%20use%20of%20reference%20strand-mediated%20conformational%20analysis%20for%20the%20study%20of%20cheetah%20%28Acinonyx%20jubatus%29%20feline%20leucocyte%20antigen%20class%20II%20DRB%20polymorphisms&amp;journal=Mol%20Ecol&amp;doi=10.1046%2Fj.1365-294X.2003.02027.x&amp;publication_year=2004&amp;author=Drake%2CGJC&amp;author=Kennedy%2CLJ&amp;author=Auty%2CHK&amp;author=Ryvar%2CR&amp;author=Ollier%2CWER&amp;author=Kitchener%2CAC&amp;author=Freeman%2CAR&amp;author=Radford%2CAD\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR98\">Burnett RC, Geraghty DE. Structure and expression of a divergent canine class I gene. J Immunol. 1995. <a href=\"https:\/\/doi.org\/10.4049\/jimmunol.155.9.4278\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.4049\/jimmunol.155.9.4278\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.4049\/jimmunol.155.9.4278<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.4049\/jimmunol.155.9.4278\" data-track-item_id=\"10.4049\/jimmunol.155.9.4278\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.4049%2Fjimmunol.155.9.4278\" aria-label=\"Article reference 98\" data-doi=\"10.4049\/jimmunol.155.9.4278\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=7594586\" aria-label=\"PubMed reference 98\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 98\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Structure%20and%20expression%20of%20a%20divergent%20canine%20class%20I%20gene&amp;journal=J%20Immunol&amp;doi=10.4049%2Fjimmunol.155.9.4278&amp;publication_year=1995&amp;author=Burnett%2CRC&amp;author=Geraghty%2CDE\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR99\">Zhu Y, Sun DD, Ge YF, Yu B, Chen YY, Wan QH. Isolation and characterization of class I MHC genes in the giant panda (Ailuropoda melanoleuca). Chin Sci Bull. 2013. <a href=\"https:\/\/doi.org\/10.1007\/s11434-012-5582-4\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/s11434-012-5582-4\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/s11434-012-5582-4<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1007\/s11434-012-5582-4\" data-track-item_id=\"10.1007\/s11434-012-5582-4\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1007\/s11434-012-5582-4\" aria-label=\"Article reference 99\" data-doi=\"10.1007\/s11434-012-5582-4\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 99\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Isolation%20and%20characterization%20of%20class%20I%20MHC%20genes%20in%20the%20giant%20panda%20%28Ailuropoda%20melanoleuca%29&amp;journal=Chin%20Sci%20Bull&amp;doi=10.1007%2Fs11434-012-5582-4&amp;publication_year=2013&amp;author=Zhu%2CY&amp;author=Sun%2CDD&amp;author=Ge%2CYF&amp;author=Yu%2CB&amp;author=Chen%2CYY&amp;author=Wan%2CQH\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR100\">D\u2019Souza MP, Adams E, Altman JD, Birnbaum ME, Boggiano C, Casorati G, Chien YH, Conley A, Eckle SBG, Fr\u00fch K, et al. Casting a wider net: immunosurveillance by nonclassical MHC molecules. PLoS Pathog. 2019;15(2):e1007567.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=30789961\" aria-label=\"PubMed reference 100\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6383864\" aria-label=\"PubMed Central reference 100\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 100\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Casting%20a%20wider%20net%3A%20immunosurveillance%20by%20nonclassical%20MHC%20molecules&amp;journal=PLoS%20Pathog&amp;volume=15&amp;issue=2&amp;publication_year=2019&amp;author=D%E2%80%99Souza%2CMP&amp;author=Adams%2CE&amp;author=Altman%2CJD&amp;author=Birnbaum%2CME&amp;author=Boggiano%2CC&amp;author=Casorati%2CG&amp;author=Chien%2CYH&amp;author=Conley%2CA&amp;author=Eckle%2CSBG&amp;author=Fr%C3%BCh%2CK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR101\">Upham NS, Esselstyn JA, Jetz W. Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation. PLoS Biol. 2019. <a href=\"https:\/\/doi.org\/10.1371\/journal.pbio.3000494\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1371\/journal.pbio.3000494\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1371\/journal.pbio.3000494<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1371\/journal.pbio.3000494\" data-track-item_id=\"10.1371\/journal.pbio.3000494\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1371%2Fjournal.pbio.3000494\" aria-label=\"Article reference 101\" data-doi=\"10.1371\/journal.pbio.3000494\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=31800571\" aria-label=\"PubMed reference 101\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6892540\" aria-label=\"PubMed Central reference 101\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 101\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Inferring%20the%20mammal%20tree%3A%20Species-level%20sets%20of%20phylogenies%20for%20questions%20in%20ecology%2C%20evolution%2C%20and%20conservation&amp;journal=PLoS%20Biol&amp;doi=10.1371%2Fjournal.pbio.3000494&amp;publication_year=2019&amp;author=Upham%2CNS&amp;author=Esselstyn%2CJA&amp;author=Jetz%2CW\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR102\">Revell LJ. Phytools: an R package for phylogenetic comparative biology (and other things). Methods Ecol Evol. 2012. <a href=\"https:\/\/doi.org\/10.1111\/j.2041-210X.2011.00169.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/j.2041-210X.2011.00169.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/j.2041-210X.2011.00169.x<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/j.2041-210X.2011.00169.x\" data-track-item_id=\"10.1111\/j.2041-210X.2011.00169.x\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fj.2041-210X.2011.00169.x\" aria-label=\"Article reference 102\" data-doi=\"10.1111\/j.2041-210X.2011.00169.x\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 102\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Phytools%3A%20an%20R%20package%20for%20phylogenetic%20comparative%20biology%20%28and%20other%20things%29&amp;journal=Methods%20Ecol%20Evol&amp;doi=10.1111%2Fj.2041-210X.2011.00169.x&amp;publication_year=2012&amp;author=Revell%2CLJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR103\">Yu G, Smith DK, Zhu H, Guan Y, Lam TTY. Ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data. Methods Ecol Evol. 2017. <a href=\"https:\/\/doi.org\/10.1111\/2041-210X.12628\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/2041-210X.12628\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/2041-210X.12628<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/2041-210X.12628\" data-track-item_id=\"10.1111\/2041-210X.12628\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2F2041-210X.12628\" aria-label=\"Article reference 103\" data-doi=\"10.1111\/2041-210X.12628\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 103\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Ggtree%3A%20an%20r%20package%20for%20visualization%20and%20annotation%20of%20phylogenetic%20trees%20with%20their%20covariates%20and%20other%20associated%20data&amp;journal=Methods%20Ecol%20Evol&amp;doi=10.1111%2F2041-210X.12628&amp;publication_year=2017&amp;author=Yu%2CG&amp;author=Smith%2CDK&amp;author=Zhu%2CH&amp;author=Guan%2CY&amp;author=Lam%2CTTY\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR104\">R Core Team. R: A language and environment for statistical computing. In., <a href=\"https:\/\/www.R-project.org\/\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"https:\/\/www.R-project.org\/\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/www.R-project.org\/<\/a>: R Foundation for Statistical Computing, Vienna, Austria; 2025.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR105\">B\u00fcrkner PC. Brms: an R package for bayesian multilevel models using Stan. J Stat Softw. 2017. <a href=\"https:\/\/doi.org\/10.18637\/jss.v080.i01\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.18637\/jss.v080.i01\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.18637\/jss.v080.i01<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.18637\/jss.v080.i01\" data-track-item_id=\"10.18637\/jss.v080.i01\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.18637%2Fjss.v080.i01\" aria-label=\"Article reference 105\" data-doi=\"10.18637\/jss.v080.i01\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 105\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Brms%3A%20an%20R%20package%20for%20bayesian%20multilevel%20models%20using%20Stan&amp;journal=J%20Stat%20Softw&amp;doi=10.18637%2Fjss.v080.i01&amp;publication_year=2017&amp;author=B%C3%BCrkner%2CPC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR106\">Revell LJ. Phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ. 2024. <a href=\"https:\/\/doi.org\/10.7717\/peerj.16505\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.7717\/peerj.16505\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.7717\/peerj.16505<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.7717\/peerj.16505\" data-track-item_id=\"10.7717\/peerj.16505\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.7717%2Fpeerj.16505\" aria-label=\"Article reference 106\" data-doi=\"10.7717\/peerj.16505\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=38192598\" aria-label=\"PubMed reference 106\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC10773453\" aria-label=\"PubMed Central reference 106\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 106\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Phytools%202.0%3A%20an%20updated%20R%20ecosystem%20for%20phylogenetic%20comparative%20methods%20%28and%20other%20things%29&amp;journal=PeerJ&amp;doi=10.7717%2Fpeerj.16505&amp;publication_year=2024&amp;author=Revell%2CLJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR107\">L\u00fcdecke D. Ggeffects: tidy data frames of marginal effects from regression models. J Open Source Softw. 2018. <a href=\"https:\/\/doi.org\/10.21105\/joss.00772\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.21105\/joss.00772\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.21105\/joss.00772<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.21105\/joss.00772\" data-track-item_id=\"10.21105\/joss.00772\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.21105%2Fjoss.00772\" aria-label=\"Article reference 107\" data-doi=\"10.21105\/joss.00772\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 107\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Ggeffects%3A%20tidy%20data%20frames%20of%20marginal%20effects%20from%20regression%20models&amp;journal=J%20Open%20Source%20Softw&amp;doi=10.21105%2Fjoss.00772&amp;publication_year=2018&amp;author=L%C3%BCdecke%2CD\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR108\">Aphalo P. gginnards: Explore the Innards of \u2018ggplot2\u2019 Objects. R package version 0.2.0. 2024, <a href=\"https:\/\/cran.r-project.org\/package=gginnards\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"https:\/\/cran.r-project.org\/package=gginnards\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/cran.r-project.org\/package=gginnards<\/a><\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR109\">Slowikowski K. ggrepel: Automatically Position Non-Overlapping Text Labels with \u2018ggplot2\u2019. In., <a href=\"https:\/\/doi.org\/10.32614\/CRAN.package.ggrepel\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"https:\/\/doi.org\/10.32614\/CRAN.package.ggrepel\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.32614\/CRAN.package.ggrepel<\/a>, R package version 0.9.6 edn; 2024.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR110\">Campitelli E: ggnewscale: Multiple Fill and Colour Scales in &#8216;ggplot2&#8217;. In., <a href=\"https:\/\/doi.org\/10.32614\/CRAN.package.ggnewscale,\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.32614\/CRAN.package.ggnewscale,\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.32614\/CRAN.package.ggnewscale,<\/a> R package version 0.5.2 edn; 2025.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR111\">Wickham H. ggplot2: Elegant Graphics for Data Analysis. Second Edition. Springer; 2016.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR112\">Singh PB. The present status of the \u2018carrier hypothesis\u2019 for chemosensory recognition of genetic individuality. Genetica. 1998. <a href=\"https:\/\/doi.org\/10.1023\/A:1026475118901\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1023\/A:1026475118901\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1023\/A:1026475118901<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1023\/A:1026475118901\" data-track-item_id=\"10.1023\/A:1026475118901\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1023%2FA%3A1026475118901\" aria-label=\"Article reference 112\" data-doi=\"10.1023\/A:1026475118901\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10386387\" aria-label=\"PubMed reference 112\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 112\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=The%20present%20status%20of%20the%20%E2%80%98carrier%20hypothesis%E2%80%99%20for%20chemosensory%20recognition%20of%20genetic%20individuality&amp;journal=Genetica&amp;doi=10.1023%2FA%3A1026475118901&amp;publication_year=1998&amp;author=Singh%2CPB\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR113\">Maccari G, Robinson J, Bontrop RE, Otting N, de Groot NG, Ho CS, Ballingall KT, Marsh SGE, Hammond JA. IPD-MHC: nomenclature requirements for the non-human major histocompatibility complex in the next-generation sequencing era. Immunogenetics. 2018. <a href=\"https:\/\/doi.org\/10.1007\/s00251-018-1072-4\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/s00251-018-1072-4\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/s00251-018-1072-4<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1007\/s00251-018-1072-4\" data-track-item_id=\"10.1007\/s00251-018-1072-4\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1007\/s00251-018-1072-4\" aria-label=\"Article reference 113\" data-doi=\"10.1007\/s00251-018-1072-4\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=30039257\" aria-label=\"PubMed reference 113\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6182402\" aria-label=\"PubMed Central reference 113\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 113\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=IPD-MHC%3A%20nomenclature%20requirements%20for%20the%20non-human%20major%20histocompatibility%20complex%20in%20the%20next-generation%20sequencing%20era&amp;journal=Immunogenetics&amp;doi=10.1007%2Fs00251-018-1072-4&amp;publication_year=2018&amp;author=Maccari%2CG&amp;author=Robinson%2CJ&amp;author=Bontrop%2CRE&amp;author=Otting%2CN&amp;author=Groot%2CNG&amp;author=Ho%2CCS&amp;author=Ballingall%2CKT&amp;author=Marsh%2CSGE&amp;author=Hammond%2CJA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR114\">Kelley J, Walter L, Trowsdale J. Comparative genomics of major histocompatibility complexes. Immunogenetics. 2005;56:683\u201395.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=15605248\" aria-label=\"PubMed reference 114\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 114\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Comparative%20genomics%20of%20major%20histocompatibility%20complexes&amp;journal=Immunogenetics&amp;volume=56&amp;pages=683-95&amp;publication_year=2005&amp;author=Kelley%2CJ&amp;author=Walter%2CL&amp;author=Trowsdale%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR115\">Winternitz JC, Wares JP. Duplication and population dynamics shape historic patterns of selection and genetic variation at the major histocompatibility complex in rodents. Ecol Evol. 2013;3(6):1552\u201368.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23789067\" aria-label=\"PubMed reference 115\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3686191\" aria-label=\"PubMed Central reference 115\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 115\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Duplication%20and%20population%20dynamics%20shape%20historic%20patterns%20of%20selection%20and%20genetic%20variation%20at%20the%20major%20histocompatibility%20complex%20in%20rodents&amp;journal=Ecol%20Evol&amp;volume=3&amp;issue=6&amp;pages=1552-68&amp;publication_year=2013&amp;author=Winternitz%2CJC&amp;author=Wares%2CJP\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR116\">Sommer S. The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Front Zool. 2005;2:1\u201318.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 116\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=The%20importance%20of%20immune%20gene%20variability%20%28MHC%29%20in%20evolutionary%20ecology%20and%20conservation&amp;journal=Front%20Zool&amp;volume=2&amp;pages=1-18&amp;publication_year=2005&amp;author=Sommer%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR117\">Ujvari B, Belov K. Major histocompatibility complex (MHC) markers in conservation biology. Int J Mol Sci. 2011;12(8):5168\u201386.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21954351\" aria-label=\"PubMed reference 117\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3179158\" aria-label=\"PubMed Central reference 117\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 117\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Major%20histocompatibility%20complex%20%28MHC%29%20markers%20in%20conservation%20biology&amp;journal=Int%20J%20Mol%20Sci&amp;volume=12&amp;issue=8&amp;pages=5168-86&amp;publication_year=2011&amp;author=Ujvari%2CB&amp;author=Belov%2CK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR118\">Coker OM, Osaiyuw OH, Fatoki AO. Major histocompatibility complex (MHC) diversity and its implications in human and wildlife health and conservation. Genet Biodivers J. 2023;7(2):1\u201311.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 118\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Major%20histocompatibility%20complex%20%28MHC%29%20diversity%20and%20its%20implications%20in%20human%20and%20wildlife%20health%20and%20conservation&amp;journal=Genet%20Biodivers%20J&amp;volume=7&amp;issue=2&amp;pages=1-11&amp;publication_year=2023&amp;author=Coker%2COM&amp;author=Osaiyuw%2COH&amp;author=Fatoki%2CAO\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR119\">Nichols HJ, Jordan NR, Jamie GA, Cant MA, Hoffman JI. Fine-scale Spatiotemporal patterns of genetic variation reflect budding dispersal coupled with strong Natal philopatry in a cooperatively breeding mammal. Mol Ecol. 2012;21(21):5348\u201362.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22994210\" aria-label=\"PubMed reference 119\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 119\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Fine-scale%20Spatiotemporal%20patterns%20of%20genetic%20variation%20reflect%20budding%20dispersal%20coupled%20with%20strong%20Natal%20philopatry%20in%20a%20cooperatively%20breeding%20mammal&amp;journal=Mol%20Ecol&amp;volume=21&amp;issue=21&amp;pages=5348-62&amp;publication_year=2012&amp;author=Nichols%2CHJ&amp;author=Jordan%2CNR&amp;author=Jamie%2CGA&amp;author=Cant%2CMA&amp;author=Hoffman%2CJI\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR120\">Schubert N, Nichols HJ, Mwanguhya F, Businge R, Kyambulima S, Mwesige K, Hoffman JI, Cant MA, Winternitz JC. Sex-dependent influence of major histocompatibility complex diversity on fitness in a social mammal. BioRxiv. 2024. <a href=\"https:\/\/doi.org\/10.1101\/2024.12.18.629201\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1101\/2024.12.18.629201\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1101\/2024.12.18.629201<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1101\/2024.12.18.629201\" data-track-item_id=\"10.1101\/2024.12.18.629201\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1101%2F2024.12.18.629201\" aria-label=\"Article reference 120\" data-doi=\"10.1101\/2024.12.18.629201\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=39416138\" aria-label=\"PubMed reference 120\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC11482874\" aria-label=\"PubMed Central reference 120\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 120\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Sex-dependent%20influence%20of%20major%20histocompatibility%20complex%20diversity%20on%20fitness%20in%20a%20social%20mammal&amp;journal=BioRxiv&amp;doi=10.1101%2F2024.12.18.629201&amp;publication_year=2024&amp;author=Schubert%2CN&amp;author=Nichols%2CHJ&amp;author=Mwanguhya%2CF&amp;author=Businge%2CR&amp;author=Kyambulima%2CS&amp;author=Mwesige%2CK&amp;author=Hoffman%2CJI&amp;author=Cant%2CMA&amp;author=Winternitz%2CJC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR121\">Gonzalez-Galarza Faviel F, McCabe A, Santos Eduardo J, Md, Jones J, Takeshita L, Ortega-Rivera Nestor D, Cid-Pavon Glenda MD, Ramsbottom K, Ghattaoraya G, Alfirevic A, et al. Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools. Nucleic Acids Res. 2019;48(D1):D783\u20138.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7145554\" aria-label=\"PubMed Central reference 121\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 121\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Allele%20frequency%20net%20database%20%28AFND%29%202020%20update%3A%20gold-standard%20data%20classification%2C%20open%20access%20genotype%20data%20and%20new%20query%20tools&amp;journal=Nucleic%20Acids%20Res&amp;volume=48&amp;issue=D1&amp;pages=D783-8&amp;publication_year=2019&amp;author=Gonzalez-Galarza%20Faviel%2CF&amp;author=McCabe%2CA&amp;author=Santos%20Eduardo%2CJ&amp;author=Md%2C%20Jones%2CJ&amp;author=Takeshita%2CL&amp;author=Ortega-Rivera%20Nestor%2CD&amp;author=Cid-Pavon%20Glenda%2CMD&amp;author=Ramsbottom%2CK&amp;author=Ghattaoraya%2CG&amp;author=Alfirevic%2CA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR122\">Schaschl H, Herzog T, Oberreiter V, Kutanan W, Jakobsson M, Larena M. HLA diversity and signatures of selection in the Maniq, a nomadic hunter-gatherer population in Southern Thailand. Immunogenetics. 2025;77(1):23.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=40488890\" aria-label=\"PubMed reference 122\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC12148999\" aria-label=\"PubMed Central reference 122\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 122\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=HLA%20diversity%20and%20signatures%20of%20selection%20in%20the%20Maniq%2C%20a%20nomadic%20hunter-gatherer%20population%20in%20Southern%20Thailand&amp;journal=Immunogenetics&amp;volume=77&amp;issue=1&amp;publication_year=2025&amp;author=Schaschl%2CH&amp;author=Herzog%2CT&amp;author=Oberreiter%2CV&amp;author=Kutanan%2CW&amp;author=Jakobsson%2CM&amp;author=Larena%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR123\">Denyer AL, Massey JP, Davison LJ, Ollier WER, Catchpole B, Kennedy LJ. Dog leucocyte antigen (DLA) class II haplotypes and risk of canine diabetes mellitus in specific dog breeds. Canine Med Genet. 2020;7(1):15.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=33292601\" aria-label=\"PubMed reference 123\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7603736\" aria-label=\"PubMed Central reference 123\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 123\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Dog%20leucocyte%20antigen%20%28DLA%29%20class%20II%20haplotypes%20and%20risk%20of%20canine%20diabetes%20mellitus%20in%20specific%20dog%20breeds&amp;journal=Canine%20Med%20Genet&amp;volume=7&amp;issue=1&amp;publication_year=2020&amp;author=Denyer%2CAL&amp;author=Massey%2CJP&amp;author=Davison%2CLJ&amp;author=Ollier%2CWER&amp;author=Catchpole%2CB&amp;author=Kennedy%2CLJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR124\">Nielsen JF, English S, Goodall-Copestake WP, Wang J, Walling CA, Bateman AW, Flower TP, Sutcliffe RL, Samson J, Thavarajah NK, et al. Inbreeding and inbreeding depression of early life traits in a cooperative mammal. Mol Ecol. 2012. <a href=\"https:\/\/doi.org\/10.1111\/j.1365-294X.2012.05565.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/j.1365-294X.2012.05565.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/j.1365-294X.2012.05565.x<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/j.1365-294X.2012.05565.x\" data-track-item_id=\"10.1111\/j.1365-294X.2012.05565.x\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fj.1365-294X.2012.05565.x\" aria-label=\"Article reference 124\" data-doi=\"10.1111\/j.1365-294X.2012.05565.x\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=22694661\" aria-label=\"PubMed reference 124\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 124\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Inbreeding%20and%20inbreeding%20depression%20of%20early%20life%20traits%20in%20a%20cooperative%20mammal&amp;journal=Mol%20Ecol&amp;doi=10.1111%2Fj.1365-294X.2012.05565.x&amp;publication_year=2012&amp;author=Nielsen%2CJF&amp;author=English%2CS&amp;author=Goodall-Copestake%2CWP&amp;author=Wang%2CJ&amp;author=Walling%2CCA&amp;author=Bateman%2CAW&amp;author=Flower%2CTP&amp;author=Sutcliffe%2CRL&amp;author=Samson%2CJ&amp;author=Thavarajah%2CNK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR125\">Mueller-Klein N, Risely A, Wilhelm K, Riegel V, Manser M, Clutton-Brock T, Santos P, Melville D, Sommer S. Twenty-year co-evolutionary arms race between meerkat MHC and tuberculosis. PREPRINT (Version 1) Available Res Square. 2024. <a href=\"https:\/\/doi.org\/10.21203\/rs.3.rs-4685784\/v1\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.21203\/rs.3.rs-4685784\/v1\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.21203\/rs.3.rs-4685784\/v1<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.21203\/rs.3.rs-4685784\/v1\" data-track-item_id=\"10.21203\/rs.3.rs-4685784\/v1\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.21203%2Frs.3.rs-4685784%2Fv1\" aria-label=\"Article reference 125\" data-doi=\"10.21203\/rs.3.rs-4685784\/v1\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 125\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Twenty-year%20co-evolutionary%20arms%20race%20between%20meerkat%20MHC%20and%20tuberculosis&amp;journal=PREPRINT%20%28Version%201%29%20Available%20Res%20Square&amp;doi=10.21203%2Frs.3.rs-4685784%2Fv1&amp;publication_year=2024&amp;author=Mueller-Klein%2CN&amp;author=Risely%2CA&amp;author=Wilhelm%2CK&amp;author=Riegel%2CV&amp;author=Manser%2CM&amp;author=Clutton-Brock%2CT&amp;author=Santos%2CP&amp;author=Melville%2CD&amp;author=Sommer%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR126\">Cutrera AP, Lacey EA. Major histocompatibility complex variation in Talas tuco-tucos: the influence of demography on selection. J Mammal. 2006;87(4):706\u201316.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 126\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Major%20histocompatibility%20complex%20variation%20in%20Talas%20tuco-tucos%3A%20the%20influence%20of%20demography%20on%20selection&amp;journal=J%20Mammal&amp;volume=87&amp;issue=4&amp;pages=706-16&amp;publication_year=2006&amp;author=Cutrera%2CAP&amp;author=Lacey%2CEA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR127\">Anderson RM, May RM. Population biology of infectious diseases: part I. Nature. 1979;280(5721):361\u20137.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=460412\" aria-label=\"PubMed reference 127\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 127\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Population%20biology%20of%20infectious%20diseases%3A%20part%20I&amp;journal=Nature&amp;volume=280&amp;issue=5721&amp;pages=361-7&amp;publication_year=1979&amp;author=Anderson%2CRM&amp;author=May%2CRM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR128\">Altizer S, Nunn CL, Thrall PH, Gittleman JL, Antonovics J, Cunningham AA, Dobson AP, Ezenwa V, Jones KE, Pedersen AB et al. Social organization and parasite risk in mammals: Integrating theory and empirical studies. Annual Review of Ecology, Evolution, and Systematics 2003, 34(Volume 34, 2003):517\u2013547.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR129\">C\u00f4t\u00e9 IM, Poulin R. Parasitism and group size in social animals: a meta-analysis. Behav Ecol. 1995;6(2):159\u201365.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 129\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Parasitism%20and%20group%20size%20in%20social%20animals%3A%20a%20meta-analysis&amp;journal=Behav%20Ecol&amp;volume=6&amp;issue=2&amp;pages=159-65&amp;publication_year=1995&amp;author=C%C3%B4t%C3%A9%2CIM&amp;author=Poulin%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR130\">Hambuch TM, Lacey EA. Enhanced selection for Mhc diversity in social tuco-tucos. Evolution. 2002;56(4):841\u20135.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=12038542\" aria-label=\"PubMed reference 130\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 130\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Enhanced%20selection%20for%20Mhc%20diversity%20in%20social%20tuco-tucos&amp;journal=Evolution&amp;volume=56&amp;issue=4&amp;pages=841-5&amp;publication_year=2002&amp;author=Hambuch%2CTM&amp;author=Lacey%2CEA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR131\">Minias P, Whittingham LA, Dunn PO. Coloniality and migration are related to selection on MHC genes in birds. Evolution. 2017;71(2):432\u201341.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27921293\" aria-label=\"PubMed reference 131\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 131\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Coloniality%20and%20migration%20are%20related%20to%20selection%20on%20MHC%20genes%20in%20birds&amp;journal=Evolution&amp;volume=71&amp;issue=2&amp;pages=432-41&amp;publication_year=2017&amp;author=Minias%2CP&amp;author=Whittingham%2CLA&amp;author=Dunn%2CPO\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR132\">Cant MA. Social control of reproduction in banded mongooses. Anim Behav. 2000. <a href=\"https:\/\/doi.org\/10.1006\/anbe.1999.1279\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1006\/anbe.1999.1279\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1006\/anbe.1999.1279<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1006\/anbe.1999.1279\" data-track-item_id=\"10.1006\/anbe.1999.1279\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1006%2Fanbe.1999.1279\" aria-label=\"Article reference 132\" data-doi=\"10.1006\/anbe.1999.1279\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10640376\" aria-label=\"PubMed reference 132\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 132\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Social%20control%20of%20reproduction%20in%20banded%20mongooses&amp;journal=Anim%20Behav&amp;doi=10.1006%2Fanbe.1999.1279&amp;publication_year=2000&amp;author=Cant%2CMA\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR133\">Nichols HJ, Amos W, Cant MA, Bell MBV, Hodge SJ. Top males gain high reproductive success by guarding more successful females in a cooperatively breeding mongoose. Anim Behav. 2010. <a href=\"https:\/\/doi.org\/10.1016\/j.anbehav.2010.06.025\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1016\/j.anbehav.2010.06.025\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1016\/j.anbehav.2010.06.025<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1016\/j.anbehav.2010.06.025\" data-track-item_id=\"10.1016\/j.anbehav.2010.06.025\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1016%2Fj.anbehav.2010.06.025\" aria-label=\"Article reference 133\" data-doi=\"10.1016\/j.anbehav.2010.06.025\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 133\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Top%20males%20gain%20high%20reproductive%20success%20by%20guarding%20more%20successful%20females%20in%20a%20cooperatively%20breeding%20mongoose&amp;journal=Anim%20Behav&amp;doi=10.1016%2Fj.anbehav.2010.06.025&amp;publication_year=2010&amp;author=Nichols%2CHJ&amp;author=Amos%2CW&amp;author=Cant%2CMA&amp;author=Bell%2CMBV&amp;author=Hodge%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR134\">Birch G, Nichols HJ, Mwanguhya F, Thompson FJ, Cant MA, Blount JD. Lifetime trajectories of male mating effort under reproductive conflict in a cooperatively breeding mammal. Proceedings B 2024, 291(2031):20241499\u201320241499.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR135\">Mitchell J, Vitikainen EIK, Wells DA, Cant MA, Nichols HJ. Heterozygosity but not inbreeding coefficient predicts parasite burdens in the banded mongoose. J Zool. 2017. <a href=\"https:\/\/doi.org\/10.1111\/jzo.12424\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/jzo.12424\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/jzo.12424<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/jzo.12424\" data-track-item_id=\"10.1111\/jzo.12424\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fjzo.12424\" aria-label=\"Article reference 135\" data-doi=\"10.1111\/jzo.12424\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 135\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Heterozygosity%20but%20not%20inbreeding%20coefficient%20predicts%20parasite%20burdens%20in%20the%20banded%20mongoose&amp;journal=J%20Zool&amp;doi=10.1111%2Fjzo.12424&amp;publication_year=2017&amp;author=Mitchell%2CJ&amp;author=Vitikainen%2CEIK&amp;author=Wells%2CDA&amp;author=Cant%2CMA&amp;author=Nichols%2CHJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR136\">Winternitz JC, Abbate JL. The genes of attraction: Mating behavior, immunogenetic variation, and parasite resistance. In: Animal Behavior and Parasitism. Edited by Ezenwa V, Altizer SM, Hall R. <a href=\"https:\/\/doi.org\/10.1093\/oso\/9780192895561.003.0011\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1093\/oso\/9780192895561.003.0011\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1093\/oso\/9780192895561.003.0011<\/a>: Oxford University Press; 2022.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR137\">Winternitz J, Abbate JL, Huchard E, Havl\u00ed\u010dek J, Garamszegi LZ. Patterns of MHC-dependent mate selection in humans and nonhuman primates: a meta\u2010analysis. Mol Ecol. 2017;26(2):668\u201388.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=27859823\" aria-label=\"PubMed reference 137\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 137\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Patterns%20of%20MHC-dependent%20mate%20selection%20in%20humans%20and%20nonhuman%20primates%3A%20a%20meta%E2%80%90analysis&amp;journal=Mol%20Ecol&amp;volume=26&amp;issue=2&amp;pages=668-88&amp;publication_year=2017&amp;author=Winternitz%2CJ&amp;author=Abbate%2CJL&amp;author=Huchard%2CE&amp;author=Havl%C3%AD%C4%8Dek%2CJ&amp;author=Garamszegi%2CLZ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR138\">Kamiya T, O\u2019Dwyer K, Westerdahl H, Senior A, Nakagawa S. A quantitative review of MHC-based mating preference: the role of diversity and dissimilarity. Mol Ecol. 2014;23(21):5151\u201363.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=25251264\" aria-label=\"PubMed reference 138\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 138\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=A%20quantitative%20review%20of%20MHC-based%20mating%20preference%3A%20the%20role%20of%20diversity%20and%20dissimilarity&amp;journal=Mol%20Ecol&amp;volume=23&amp;issue=21&amp;pages=5151-63&amp;publication_year=2014&amp;author=Kamiya%2CT&amp;author=O%E2%80%99Dwyer%2CK&amp;author=Westerdahl%2CH&amp;author=Senior%2CA&amp;author=Nakagawa%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR139\">Abduriyim S, Nishita Y, Kosintsev PA, Raichev E, V\u00e4in\u00f6l\u00e4 R, Kryukov AP, Abramov AV, Kaneko Y, Masuda R. Evolution of MHC class I genes in Eurasian badgers, genus Meles (Carnivora, Mustelidae). Heredity. 2019;122(2):205\u201318.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=29959426\" aria-label=\"PubMed reference 139\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 139\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Evolution%20of%20MHC%20class%20I%20genes%20in%20Eurasian%20badgers%2C%20genus%20Meles%20%28Carnivora%2C%20Mustelidae%29&amp;journal=Heredity&amp;volume=122&amp;issue=2&amp;pages=205-18&amp;publication_year=2019&amp;author=Abduriyim%2CS&amp;author=Nishita%2CY&amp;author=Kosintsev%2CPA&amp;author=Raichev%2CE&amp;author=V%C3%A4in%C3%B6l%C3%A4%2CR&amp;author=Kryukov%2CAP&amp;author=Abramov%2CAV&amp;author=Kaneko%2CY&amp;author=Masuda%2CR\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR140\">Zhang C, Anderson A, DeLisi C. Structural principles that govern the peptide-binding motifs of class I MHC molecules. J Mol Biol. 1998. <a href=\"https:\/\/doi.org\/10.1006\/jmbi.1998.1982\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1006\/jmbi.1998.1982\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1006\/jmbi.1998.1982<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1006\/jmbi.1998.1982\" data-track-item_id=\"10.1006\/jmbi.1998.1982\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1006%2Fjmbi.1998.1982\" aria-label=\"Article reference 140\" data-doi=\"10.1006\/jmbi.1998.1982\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=9878351\" aria-label=\"PubMed reference 140\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 140\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Structural%20principles%20that%20govern%20the%20peptide-binding%20motifs%20of%20class%20I%20MHC%20molecules&amp;journal=J%20Mol%20Biol&amp;doi=10.1006%2Fjmbi.1998.1982&amp;publication_year=1998&amp;author=Zhang%2CC&amp;author=Anderson%2CA&amp;author=DeLisi%2CC\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR141\">Kuduk K, Babik W, Bojarska K, \u015aliwi\u0144ska EB, Kindberg J, Taberlet P, Swenson JE, Radwan J. Evolution of major histocompatibility complex class I and class II genes in the brown bear. BMC Evol Biol. 2012. <a href=\"https:\/\/doi.org\/10.1186\/1471-2148-12-197\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1186\/1471-2148-12-197\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1186\/1471-2148-12-197<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1186\/1471-2148-12-197\" data-track-item_id=\"10.1186\/1471-2148-12-197\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1186\/1471-2148-12-197\" aria-label=\"Article reference 141\" data-doi=\"10.1186\/1471-2148-12-197\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=23031405\" aria-label=\"PubMed reference 141\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3508869\" aria-label=\"PubMed Central reference 141\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 141\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Evolution%20of%20major%20histocompatibility%20complex%20class%20I%20and%20class%20II%20genes%20in%20the%20brown%20bear&amp;journal=BMC%20Evol%20Biol&amp;doi=10.1186%2F1471-2148-12-197&amp;publication_year=2012&amp;author=Kuduk%2CK&amp;author=Babik%2CW&amp;author=Bojarska%2CK&amp;author=%C5%9Aliwi%C5%84ska%2CEB&amp;author=Kindberg%2CJ&amp;author=Taberlet%2CP&amp;author=Swenson%2CJE&amp;author=Radwan%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR142\">Abduriyim S, Zou DH, Zhao H. Origin and evolution of the major histocompatibility complex class I region in eutherian mammals. Ecol Evol. 2019. <a href=\"https:\/\/doi.org\/10.1002\/ece3.5373\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1002\/ece3.5373\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1002\/ece3.5373<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1002\/ece3.5373\" data-track-item_id=\"10.1002\/ece3.5373\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1002%2Fece3.5373\" aria-label=\"Article reference 142\" data-doi=\"10.1002\/ece3.5373\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=31346446\" aria-label=\"PubMed reference 142\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6636196\" aria-label=\"PubMed Central reference 142\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 142\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Origin%20and%20evolution%20of%20the%20major%20histocompatibility%20complex%20class%20I%20region%20in%20eutherian%20mammals&amp;journal=Ecol%20Evol&amp;doi=10.1002%2Fece3.5373&amp;publication_year=2019&amp;author=Abduriyim%2CS&amp;author=Zou%2CDH&amp;author=Zhao%2CH\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR143\">Takahashi K, Rooney AP, Nei M. Origins and divergence times of mammalian class II MHC gene clusters. J Hered. 2000;91(3):198\u2013204.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=10833044\" aria-label=\"PubMed reference 143\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 143\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Origins%20and%20divergence%20times%20of%20mammalian%20class%20II%20MHC%20gene%20clusters&amp;journal=J%20Hered&amp;volume=91&amp;issue=3&amp;pages=198-204&amp;publication_year=2000&amp;author=Takahashi%2CK&amp;author=Rooney%2CAP&amp;author=Nei%2CM\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR144\">Rammensee HG, Bachmann J, Stevanovi\u0107 S. MHC ligands and peptide motifs. Springer Science &amp; Business Media; 2013.<\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR145\">Satta Y, O\u2019Huigin C, Takahata N, Klein J. Intensity of natural selection at the major histocompatibility complex loci. Proc Natl Acad Sci USA. 1994. <a href=\"https:\/\/doi.org\/10.1073\/pnas.91.15.7184\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1073\/pnas.91.15.7184\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1073\/pnas.91.15.7184<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1073\/pnas.91.15.7184\" data-track-item_id=\"10.1073\/pnas.91.15.7184\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1073%2Fpnas.91.15.7184\" aria-label=\"Article reference 145\" data-doi=\"10.1073\/pnas.91.15.7184\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=8041766\" aria-label=\"PubMed reference 145\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC44363\" aria-label=\"PubMed Central reference 145\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 145\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Intensity%20of%20natural%20selection%20at%20the%20major%20histocompatibility%20complex%20loci&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;doi=10.1073%2Fpnas.91.15.7184&amp;publication_year=1994&amp;author=Satta%2CY&amp;author=O%E2%80%99Huigin%2CC&amp;author=Takahata%2CN&amp;author=Klein%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR146\">Babik W, Durka W, Radwan J. Sequence diversity of the MHC DRB gene in the Eurasian beaver (Castor fiber). Mol Ecol. 2005. <a href=\"https:\/\/doi.org\/10.1111\/j.1365-294X.2005.02751.x\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1111\/j.1365-294X.2005.02751.x\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1111\/j.1365-294X.2005.02751.x<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.1111\/j.1365-294X.2005.02751.x\" data-track-item_id=\"10.1111\/j.1365-294X.2005.02751.x\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.1111%2Fj.1365-294X.2005.02751.x\" aria-label=\"Article reference 146\" data-doi=\"10.1111\/j.1365-294X.2005.02751.x\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=16313590\" aria-label=\"PubMed reference 146\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 146\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Sequence%20diversity%20of%20the%20MHC%20DRB%20gene%20in%20the%20Eurasian%20beaver%20%28Castor%20fiber%29&amp;journal=Mol%20Ecol&amp;doi=10.1111%2Fj.1365-294X.2005.02751.x&amp;publication_year=2005&amp;author=Babik%2CW&amp;author=Durka%2CW&amp;author=Radwan%2CJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR147\">Castro-Prieto A, Wachter B, Melzheimer J, Thalwitzer S, Sommer S. Diversity and evolutionary patterns of immune genes in free-ranging Namibian leopards (Panthera Pardus Pardus). J Hered. 2011;102(6):653\u201365.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=21914667\" aria-label=\"PubMed reference 147\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 147\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Diversity%20and%20evolutionary%20patterns%20of%20immune%20genes%20in%20free-ranging%20Namibian%20leopards%20%28Panthera%20Pardus%20Pardus%29&amp;journal=J%20Hered&amp;volume=102&amp;issue=6&amp;pages=653-65&amp;publication_year=2011&amp;author=Castro-Prieto%2CA&amp;author=Wachter%2CB&amp;author=Melzheimer%2CJ&amp;author=Thalwitzer%2CS&amp;author=Sommer%2CS\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR148\">Yuhki N, Heidecker GF, O\u2019Brien SJ. Characterization of MHC cDNA clones in the domestic cat. Diversity and evolution of class I genes. J Immunol. 1989. <a href=\"https:\/\/doi.org\/10.4049\/jimmunol.142.10.3676\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.4049\/jimmunol.142.10.3676\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.4049\/jimmunol.142.10.3676<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"10.4049\/jimmunol.142.10.3676\" data-track-item_id=\"10.4049\/jimmunol.142.10.3676\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/doi.org\/10.4049%2Fjimmunol.142.10.3676\" aria-label=\"Article reference 148\" data-doi=\"10.4049\/jimmunol.142.10.3676\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=2715636\" aria-label=\"PubMed reference 148\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 148\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Characterization%20of%20MHC%20cDNA%20clones%20in%20the%20domestic%20cat.%20Diversity%20and%20evolution%20of%20class%20I%20genes&amp;journal=J%20Immunol&amp;doi=10.4049%2Fjimmunol.142.10.3676&amp;publication_year=1989&amp;author=Yuhki%2CN&amp;author=Heidecker%2CGF&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR149\">Yuhki N, O\u2019Brien SJ. Exchanges of short polymorphic DNA segments predating speciation in feline major histocompatibility complex class I genes. J Mol Evol. 1994. <a href=\"https:\/\/doi.org\/10.1007\/BF00178246\" data-track=\"click_references\" data-track-action=\"external reference\" data-track-value=\"external reference\" data-track-label=\"10.1007\/BF00178246\" rel=\"nofollow noopener\" target=\"_blank\">https:\/\/doi.org\/10.1007\/BF00178246<\/a>.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"noopener nofollow\" data-track-label=\"10.1007\/BF00178246\" data-track-item_id=\"10.1007\/BF00178246\" data-track-value=\"article reference\" data-track-action=\"article reference\" href=\"https:\/\/link.springer.com\/doi\/10.1007\/BF00178246\" aria-label=\"Article reference 149\" data-doi=\"10.1007\/BF00178246\" target=\"_blank\">Article<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=7932781\" aria-label=\"PubMed reference 149\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7087520\" aria-label=\"PubMed Central reference 149\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 149\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Exchanges%20of%20short%20polymorphic%20DNA%20segments%20predating%20speciation%20in%20feline%20major%20histocompatibility%20complex%20class%20I%20genes&amp;journal=J%20Mol%20Evol&amp;doi=10.1007%2FBF00178246&amp;publication_year=1994&amp;author=Yuhki%2CN&amp;author=O%E2%80%99Brien%2CSJ\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n<p class=\"c-article-references__text\" id=\"ref-CR150\">Okamura K, Dijkstra JM, Tsukamoto K, Grimholt U, Wiegertjes GF, Kondow A, Yamaguchi H, Hashimoto K. Discovery of an ancient MHC category with both class I and class II features. Proc Natl Acad Sci USA. 2021;118(51):e2108104118.<\/p>\n<p class=\"c-article-references__links u-hide-print\"><a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed reference\" data-track-action=\"pubmed reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;dopt=Abstract&amp;list_uids=34903649\" aria-label=\"PubMed reference 150\" target=\"_blank\">PubMed<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" rel=\"nofollow noopener\" data-track-label=\"link\" data-track-item_id=\"link\" data-track-value=\"pubmed central reference\" data-track-action=\"pubmed central reference\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC8713811\" aria-label=\"PubMed Central reference 150\" target=\"_blank\">PubMed Central<\/a>\u00a0<br \/>\n    <a data-track=\"click_references\" data-track-action=\"google scholar reference\" data-track-value=\"google scholar reference\" data-track-label=\"link\" data-track-item_id=\"link\" rel=\"nofollow noopener\" aria-label=\"Google Scholar reference 150\" href=\"http:\/\/scholar.google.com\/scholar_lookup?&amp;title=Discovery%20of%20an%20ancient%20MHC%20category%20with%20both%20class%20I%20and%20class%20II%20features&amp;journal=Proc%20Natl%20Acad%20Sci%20USA&amp;volume=118&amp;issue=51&amp;publication_year=2021&amp;author=Okamura%2CK&amp;author=Dijkstra%2CJM&amp;author=Tsukamoto%2CK&amp;author=Grimholt%2CU&amp;author=Wiegertjes%2CGF&amp;author=Kondow%2CA&amp;author=Yamaguchi%2CH&amp;author=Hashimoto%2CK\" target=\"_blank\"><br \/>\n                    Google Scholar<\/a>\u00a0\n                <\/p>\n","protected":false},"excerpt":{"rendered":"Bitarello BD, De Filippo C, Teixeira JC, Schmidt JM, Kleinert P, Meyer D, Andres AM. Signatures of long-term&hellip;\n","protected":false},"author":2,"featured_media":73537,"comment_status":"","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7],"tags":[52304,52300,52302,34661,18698,3181,22456,52305,85,46,3183,52298,52299,52303,141,52301],"class_list":{"0":"post-73536","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-science","8":"tag-animal-systematics-taxonomy-biogeography","9":"tag-balancing-selection","10":"tag-carnivore","11":"tag-entomology","12":"tag-evolutionary-biology","13":"tag-general","14":"tag-genetic-diversity","15":"tag-genetics-and-population-dynamics","16":"tag-il","17":"tag-israel","18":"tag-life-sciences","19":"tag-mhc","20":"tag-mungos-mungo","21":"tag-phylogenetic-mixed-model","22":"tag-science","23":"tag-trans-species-polymorphism"},"_links":{"self":[{"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/posts\/73536","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/comments?post=73536"}],"version-history":[{"count":0,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/posts\/73536\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/media\/73537"}],"wp:attachment":[{"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/media?parent=73536"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/categories?post=73536"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.newsbeep.com\/il\/wp-json\/wp\/v2\/tags?post=73536"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}