NutriMatch: harmonizing food composition databases with large language models for enhanced nutritional prediction
Data collection We utilized data from the 10K Project, a prospective human cohort study involving over 10,000 healthy…
Twisted graphene puts magnetic fields in check
A graphene-based quantum sensor uses two decoupled layers to form a quantized 4 × 4 Landau-level checkerboard when…
Sensing technologies for silent speech interfaces
Denby, B. et al. Silent speech interfaces. Speech Commun. 52, 270–287 (2010). This comprehensive review formalizes SSIs as…
Multimodal learning enables chat-based exploration of single-cell data
Multimodal training data of paired transcriptomes and text To establish a large training dataset of transcriptomes and their…
Large-scale visualization of α-synuclein oligomers in Parkinson’s disease brain tissue
Autofluorescence suppression and high-sensitivity microscopy reveals nanoscale assemblies in human brain tissue An overview of the ASA–PD pipeline…
MSnLib: efficient generation of open multi-stage fragmentation mass spectral libraries
Materials All solvents used were of LC–MS grade. Methanol, acetonitrile, water and formic acid were obtained from Thermo…
Bioactive molecules unearthed by terabase-scale long-read sequencing of a soil metagenome
Bacterial strains and growth conditions All strains, unless otherwise specified, were grown in Luria–Bertani (LB) at 30 °C with…
Efficient sequence alignment against millions of prokaryotic genomes with LexicMap
Probe generation Probes, also referred to as ‘masks’ in the LexicHash paper, consist of a fixed number (m = 20,000…
Systema: a framework for evaluating genetic perturbation response prediction beyond systematic variation
Nonparametric baselines We design two nonparametric baselines that we refer to as perturbed mean and matching mean. Perturbed…
CRISPR-GPT for agentic automation of gene-editing experiments
Building AI co-pilot harnessing LLM’s reasoning ability CRISPR-GPT supports four major gene-editing modalities and 22 gene-editing experiment tasks…
Morphological map of under- and overexpression of genes in human cells
Mattiazzi Usaj, M. et al. High-content screening for quantitative cell biology. Trends Cell Biol. 26, 598–611 (2016). CAS …
The Platinum Pedigree: a long-read benchmark for genetic variants
Gonzaga-Jauregui, C., Lupski, J. R. & Gibbs, R. A. Human genome sequencing in health and disease. Annu. Rev.…